Gene BamMC406_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2103 
Symbol 
ID6177236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2350153 
End bp2350848 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content57% 
IMG OID641681871 
ProductXRE family transcriptional regulator 
Protein accessionYP_001808799 
Protein GI172061147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTA CCGGAAACTC TCAACAAAGC CGCATGCTCA CCCCGGCCGA ACTGGCCGTG 
TGCATCAAGT TGTTCCGGGA GACACGGCAA TGGTCACAAG AACAACTGGC GGCGATTTCG
GGACTGAGCG TGCGCACGGT CCAGCGTGTC GAGCAAGGCT TGTCCGCCAG CCTCGATACC
CGGCGCGCGC TCGCCAGTGC ATTCGAGTTC GAAGATATCG ATGCGCTCAA CAAGCCGTTC
TCGATCCCAT CCGAAGAAGA ATTCAAGGCA GAGAAGGAAA AGTTTGACCG GGAGCATGTC
ACCTTGACGG CACTTCCCTT GACCACGGGC AAGCAATTGG CGAAGCTCGC GGAAACCTGC
CACGCGGACT TATCTGAACC GGCTTTCGAG TTGACCCGCG AAGCAGATGA GACTTTTGCC
ATGCTTGTGG ACTATTTACG AGATTTCCGG GATTGCGCCG ATGCGGTCAG CGAAACCCAA
AAATTTGATG TGTACGACGA GTTGCAGTGT CACATCGACG CGCTCAAGAC ACTCGGTGTC
TCGCTACGCT ACGCAGAACG GAAGATGCAG GTGAAGTTCG GGGCAGACGA GAACAGCAAG
CCGATGCCCA TCAACGTGCT GTACGTAGTC GCCTTTCCGC TCGGCAAGGA GCCGGAGCAA
TTTGCGACCC CAAGGTCCGG GGGGCTTGGC TTGTAA
 
Protein sequence
MNGTGNSQQS RMLTPAELAV CIKLFRETRQ WSQEQLAAIS GLSVRTVQRV EQGLSASLDT 
RRALASAFEF EDIDALNKPF SIPSEEEFKA EKEKFDREHV TLTALPLTTG KQLAKLAETC
HADLSEPAFE LTREADETFA MLVDYLRDFR DCADAVSETQ KFDVYDELQC HIDALKTLGV
SLRYAERKMQ VKFGADENSK PMPINVLYVV AFPLGKEPEQ FATPRSGGLG L