| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2100 |
|---|
| Symbol | |
|---|
| ID | 6177227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2346876 |
|---|
| End bp | 2347619 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641681867 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001808796 |
|---|
| Protein GI | 172061144 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTGCG CGACGCTCGG CGACGCGATC GCACTTGGCA TCCGCTACCT GCCGACACGC
GTGCCGTTCT TTTCGGTGCG GCTCACGCAG CGCGACGGGA TCGTCGACAT CGACGTGCTC
GAGGCGTTTG CGCTCGGCCG GCTGCGCCAG TTCGCGGTGG AAAACTTCCT GGTCGAGACG
GCGATCCTGT TCAACTCGCT GCTCGATCCC GCGCCGGGGC GCACGCTGCA GTCGCGTGCG
GAGCTGCATT TCGAATGGCC CGAGCCGCCG TGGTTCGAGC GCTATCGCGC ACGGCTGCCG
CGCTGTCATT TCAACGCGAG CGCGAACCGC ATCCGCTGCG ACGCAGCGCT GCTCGACGAG
CCGATCGGCA CTGCGAACGC GCAAACCGCG CAGATGATCG TCCAGCAATG CGAGGCCGAG
CTCGCGCGGC TCGGCTATGC GGAAAGCATC GTCGAGCGCG TGCGCAACCT GCTGATCTGC
GGTGACGCCG GCTATCCGTC AGTGGACGAC GTCGCGCGCG AACTGCACGT ATCGGCGCGG
ACGTTGAAAC GCAAGCTCGC GGAATTCGGC GCGACGTATT CGACGCTGCT CGACGAGATC
CGGCTGCGCG ATGCGCTCCG GTTGTTGGAA GGCACGCGCC TGCCGGTCGA CGAGATCGCG
GCGCGGGTCG GCTATACCGA TCGCGCGAAT TTCACGCGCG CGTTCAAGCG CTGGACCGGC
GTCGCGCCGA GCGAGCGGCG CTGA
|
|---|
| Protein sequence | MSCATLGDAI ALGIRYLPTR VPFFSVRLTQ RDGIVDIDVL EAFALGRLRQ FAVENFLVET
AILFNSLLDP APGRTLQSRA ELHFEWPEPP WFERYRARLP RCHFNASANR IRCDAALLDE
PIGTANAQTA QMIVQQCEAE LARLGYAESI VERVRNLLIC GDAGYPSVDD VARELHVSAR
TLKRKLAEFG ATYSTLLDEI RLRDALRLLE GTRLPVDEIA ARVGYTDRAN FTRAFKRWTG
VAPSERR
|
|---|
| |