Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2099 |
Symbol | |
ID | 6177220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2345742 |
End bp | 2346791 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641681866 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_001808795 |
Protein GI | 172061143 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAACA CTGATCGCCT GACCGTCGTC GTCTCGAATG CCGTCGACGG CGACCTCGCC ACGTTCTCGC TCACGTCCGA CGGCGCGCTC GCGCCGCTCG CCCGCTACCC GGCCGGCGAC GCCGCGATGC CCGTCGCCGC GCAGGCCGAT CGCGCGCGGC TGTACGTCGC GACGCGCGGC GAGCACCCGA CGATCGTCGC GTTCCGCGTC GCGAGCGCCA CCGGCGCGTT CGCCCGCATC GGCGCGACCG CGATCGACGC GAGCCTTGCG TACCTGTCGC TCGACCGCAG CGGCCGCTGG CTGCTCGGCG CGTCGTACGG CGGCAATTCG CTGAGCCTCT ACGACGCCGC ACGCGTGCGT GACGGCGACG GGGCGCCGCT GCAGGTCGTG CACGGCATCG CGAATGCGCA TGCCGTCGTC GTGTCGCCGG ACAACCGCTT CGCGTATGTG AGTTCGCTCG GCTCCGACCG GATCTTCACG TTCGCGCTGG TCGAGGATGC CGGCGGCCTG CGTGCGCTCG AACACGGCGA AACGCGCGTG CCGGGCGGCT TCGGGCCGCG TCACCTGCGC TTCGCGCGCG ACGGCCGCGC GCTCGTCGCG GTCAGCGAAT TCCAGGCGAC GCTCGCGACC TTCACACGCG ACACCGACAG CGGCCGCCTC GGCGACGCGC AGGTCAGCGC GCGGCACGCG GCCGTCGCCG ATCTCGCGCA GGGCCATGCG CGCCCGCCCG CGCCGACCGG GCCCGCCGTG TGGGCCGCCG ATCTTCACCT CACGTCCGAC GAGCGCTTCG CGTATGTCAG CGAACGCACG TCGAGCCAGT TGCTCTGCTA TCGCCGCGCC GCGGACGGCA GCTTCGAACC CGCGCACGCG ACGCTCACCG AAACGCAGCC GCGCGGCTTC GCAATCGATC CGTCGGGACG CTGGCTCGTC GCGTGCGGCG AACAGTCGGA ACACGTGTCG GTCTACGCGA TCGCGCCGAA CGACGGCACG CTGGCGTTGC ACGCGCGCGT TCCGGGTGGG CGCGGCGCGA ACTGGGTTGC GATCGTCTGA
|
Protein sequence | MPNTDRLTVV VSNAVDGDLA TFSLTSDGAL APLARYPAGD AAMPVAAQAD RARLYVATRG EHPTIVAFRV ASATGAFARI GATAIDASLA YLSLDRSGRW LLGASYGGNS LSLYDAARVR DGDGAPLQVV HGIANAHAVV VSPDNRFAYV SSLGSDRIFT FALVEDAGGL RALEHGETRV PGGFGPRHLR FARDGRALVA VSEFQATLAT FTRDTDSGRL GDAQVSARHA AVADLAQGHA RPPAPTGPAV WAADLHLTSD ERFAYVSERT SSQLLCYRRA ADGSFEPAHA TLTETQPRGF AIDPSGRWLV ACGEQSEHVS VYAIAPNDGT LALHARVPGG RGANWVAIV
|
| |