| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2088 |
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| Symbol | |
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| ID | 6179029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2333221 |
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| End bp | 2334744 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681856 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001808785 |
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| Protein GI | 172061133 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.358963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACGT TGACCCCCGG CCACCTGACC CTTCCGCAAC TGCGCAAGAT CGCTCGCGAA
CCCGTGCAGC TCACGCTCGA CCCCGCGAGC TTCGCGAAGA TCGACGCCGG CGCGAAGGCC
GTCGCCGACA TCGCGGCGAA GGGCGAGCCG GCATACGGCA TCAACACGGG CTTCGGCCGC
CTGGCCAGCA CGCACATCCC GCACGACCAG CTCGAGCTGC TGCAGAAGAA CCTCGTGCTG
TCGCACGCGG TCGGCGTGGG CGAGCCGATG GCGCGCTCGT CGGTGCGCCT GCTGATGGCG
CTGAAGCTGT CGAGCCTCGG CCGCGGCCAC TCGGGCATCC GCCGCGAGGT GATGGATGCG
CTGATCACGC TGTTCAACGC CGACGTGCTG CCGCTGATCC CGGTGAAGGG CTCGGTCGGC
GCATCGGGCG ACCTCGCGCC GCTCGCGCAC ATGTCGGCCG TGCTGCTCGG CGTCGGTGAA
GTGTTCATCC GCGGCGAGCG CGCGAGCGCG CTCGACGGTC TGCGCGTCGC GGGCCTCGCG
CCGCTGACGC TGCAGGCGAA GGAAGGCCTC GCGCTGCTGA ACGGCACGCA GGCGTCGACG
GCGCTGGCGC TCGACAACAT GTTCTCGATC GAAGACCTGT ACCGCACCGC GCTCGTCGCC
GGTGCGCTGT CGGTCGACGC GGCAGCCGGC TCGGTGAAGC CGTTCGACGC ACGCATCCAC
GAGCTGCGCG GCCATCGCGG CCAGATCGAA GCGGCCGCGG CGTACCGCGA CCTGCTCGAC
GGCTCGCCGA TCAACCAGTC GCACCGCGAC TGCGACAAGG TGCAGGATCC GTACAGCCTG
CGCTGCCAGC CGCAGGTGAT GGGCGCGTGT CTGGACCAGA TGCGCCACGC GGCCGACGTG
CTGCTGATCG AAGCGAACGC CGTGTCGGAC AACCCGCTGA TCTTCCCGGA TACCGGCGAA
GTGCTGTCGG GCGGCAACTT CCACGCCGAA CCCGTCGCAT TCGCGGCCGA CAACCTCGCA
CTCGCCGCCG CCGAAATCGG TGCGCTGGCC GAGCGCCGCA TCGCGCTGCT GATCGACGCG
ACGCTGTCGG GCCTGCCCCC GTTCCTCGTG AAGGACGGCG GCGTGAACTC GGGCTTCATG
ATCGCCCACG TGACGGCCGC CGCGCTGGCA TCGGAAAACA AGACGCTCGC GCATCCGGCA
TCGGTCGACT CGCTGCCGAC CTCGGCGAAC CAGGAAGACC ACGTGTCGAT GGCGACGTTC
GCCGCGCGCA AGCTCGCCGA CATCGCGGAC AACACGAAGT ACATCCTCGC GATCGAACTG
CTGGCCGCCG CGCAGGGCGT CGACCTGCGC GCGCCGTACC ACACGAGTCC GAAGCTGGCG
CCCGTGATGG AAACGATCCG CAGCCATGTG GCGCACTACG AGCTCGACCA CTACTTCGCA
CCGGACATCG CGGTGATCGC GAAGCTCGTC GGCGAGCGCG CGTTCGCGAA GGCCGCGCCG
TTCTCGTTCG CATCGGAACA GTAA
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| Protein sequence | MITLTPGHLT LPQLRKIARE PVQLTLDPAS FAKIDAGAKA VADIAAKGEP AYGINTGFGR
LASTHIPHDQ LELLQKNLVL SHAVGVGEPM ARSSVRLLMA LKLSSLGRGH SGIRREVMDA
LITLFNADVL PLIPVKGSVG ASGDLAPLAH MSAVLLGVGE VFIRGERASA LDGLRVAGLA
PLTLQAKEGL ALLNGTQAST ALALDNMFSI EDLYRTALVA GALSVDAAAG SVKPFDARIH
ELRGHRGQIE AAAAYRDLLD GSPINQSHRD CDKVQDPYSL RCQPQVMGAC LDQMRHAADV
LLIEANAVSD NPLIFPDTGE VLSGGNFHAE PVAFAADNLA LAAAEIGALA ERRIALLIDA
TLSGLPPFLV KDGGVNSGFM IAHVTAAALA SENKTLAHPA SVDSLPTSAN QEDHVSMATF
AARKLADIAD NTKYILAIEL LAAAQGVDLR APYHTSPKLA PVMETIRSHV AHYELDHYFA
PDIAVIAKLV GERAFAKAAP FSFASEQ
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