Gene BamMC406_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2080 
Symbol 
ID6176994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2325133 
End bp2325939 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content73% 
IMG OID641681848 
Productpeptidase C26 
Protein accessionYP_001808777 
Protein GI172061125 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.285654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC GCCCGATCGT AGCCGTCACC GCCGACCGCA TCCTGCGCGG CGCCCATCCG 
AACCACACGG CCGGCGAGAA GTATCTCGTC GCGCTGGTCG ACGGCGCCGG CGCGCTGGCG
TTCGTGCTGC CCGCGCTGGG TGCGCGGCAG CCGGTCGACG CGATCGTGGC GTCCGTCGAC
GGGCTGCTGC TGACCGGCAG CTATTCGAAC GTCGAGCCGC ATCACTACGG CGGCCCGGCG
AGTACGCCCG ACACGCTGCA CGATCCCGCG CGCGATGCGA CCGCGCTGCC GCTGATCCGC
GCGGCGATCG ATGCCGGCGT GCCGGTGCTC GCGATCTGCC GCGGGATGCA GGAGCTGAAC
GTCGCGTACG GCGGCACGCT GCATCAGCGG CTGCATGCGA GCCCCGGCTT TCACGACCAT
CGCGAGCGCG ACGGCGATCC GCTCGAGCGA CAGTACGGCC CCGCACACCG CATACAGCTT
GCGCCGGGCG GCCTGCTGCA ACGGATCGCT CGCGGCGCGC ACGACGCGAT GGTCAATTCG
CTGCACGACC AGGGCATCGA GCGGCTCGGC GCGGGGCTCG CGGCCGAAGC GAGCGCGCCC
GACGGGCTGA TCGAGGCCGT CAGCGTGCGC GGCGCGCGCG CGTTCGCGCT TGGCGTGCAG
TGGCATCCCG AATGGCGTTT CGCGGAACAG CCGCTGTCGC GCGACATCTT CGCGGCATTC
GGTGCGGCGT GCCGCGCGCG CATGACCCAT CGCATTCGTG CGGCCGGCGG CACCATGCCG
TCGCCGGCCG CATCCGACAT CGACTGA
 
Protein sequence
MRARPIVAVT ADRILRGAHP NHTAGEKYLV ALVDGAGALA FVLPALGARQ PVDAIVASVD 
GLLLTGSYSN VEPHHYGGPA STPDTLHDPA RDATALPLIR AAIDAGVPVL AICRGMQELN
VAYGGTLHQR LHASPGFHDH RERDGDPLER QYGPAHRIQL APGGLLQRIA RGAHDAMVNS
LHDQGIERLG AGLAAEASAP DGLIEAVSVR GARAFALGVQ WHPEWRFAEQ PLSRDIFAAF
GAACRARMTH RIRAAGGTMP SPAASDID