Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2079 |
Symbol | |
ID | 6176984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2323783 |
End bp | 2325120 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681847 |
Product | glutamate--putrescine ligase |
Protein accession | YP_001808776 |
Protein GI | 172061124 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0114961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCCG AACTGAGCGA ATTCCTGCGT CAGCACCGCA TCACCGAAGT CGAGGCGATC ATTCCCGACA TGGCCGGCAT CGCGCGCGGC AAGATCATTC CGCGCAACAA ATTCGAATCC GGCGAATCGA TGCGCCTGCC TCAGGCCGTG ATGGTGCAGA CCGTCACCGG CGACTATCCG GAGGACGGCT CGCTGACCGG CGTGACCGAT CCCGACATGG TGTGCGTGCC CGATCCATCG ACCATCTGCC TGATTCCGTG GGCCGTCGAT CCGACCGCGC AGGTGATCCA CGATTGCGTG CATTTCGATG GCTCGCCGGT CGAGATCTCG CCGCGCTACG TGCTGCGCCG CGTGCTCGAC CTGTACAAGG CGAAGGGCTG GAATCCCGTG GTCGCGCCGG AGCTCGAGTT CTACCTGGTC GATATGAACG CGGATCCCGA CCTGCCGTTG CGTCCGCCGA TCGGGCGCAC GGGCCGCGCG GAAACCGGCC GGCAGTCGTA TTCGATCGAG GCGGTCAACG AGTTCGATCC GTTGTTCGAG GACATCTACG AATACTGCGA GATGCAGGGG CTCGACATCG AGACGCTGAT CCACGAAGTC GGCGCCGCGC AGATGGAGAT CAACTTCGTG CACGGCGACG CGCTGTCGCT GGCCGACCAG GTGTTCCTGT TCAAGCGCAC GGTGCGCGAG GCCGCGCTGC GGCACAACAT GTACGCGACC TTCATGGCCA AGCCGATGGA AGGCGAGCCG GGCTCCGCGA TGCACATCCA CCAGAGCCTC GCCGATGTGC ACACCGGCCG CAACCTGTTC GCCGAAGAGG GCGGGGTCGT GTCGCCGATG TTCCACAGCT ATCTCGCGGG ACTGCAGAAG TACACGCCCG CGCTGATGCC GATCTTCGCG CCGTACATCA ACTCGTATCG CCGGCTGTCG CGCTTCATGG CCGCGCCGAT CAACGTGCAG TGGGGCTACG ACAACCGCAC GGTCGGCTTC CGCATCCCGC AGTCGACGCC GGTCGCGCGG CGCATCGAGA ACCGGATTCC GGGCGTCGAC TGCAACCCGT ACCTCGCGTT CGCGGCGACG CTCGCGGCCG GCTATCTCGG CCTCACCCAG CAGCTCGCGC CGACCGAACC GATCGCGTCC GACGGCTACG ACCTGCCGTA CCAGCTGCCG CGCAATCTCG AGGAGGGCAT CTCGCTGATG GCCGCGTGCA CGCCGCTCGC CGGCATTCTC GGCGACAAGT TCGTGAAGGC GTACCTGGCG CTGAAGGAAA CCGAATACGA AGCGTTCTTC CGCGTGATCA GCTCGTGGGA ACGCCGCCAT CTGCTGCTGC ACGTGTGA
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Protein sequence | MQPELSEFLR QHRITEVEAI IPDMAGIARG KIIPRNKFES GESMRLPQAV MVQTVTGDYP EDGSLTGVTD PDMVCVPDPS TICLIPWAVD PTAQVIHDCV HFDGSPVEIS PRYVLRRVLD LYKAKGWNPV VAPELEFYLV DMNADPDLPL RPPIGRTGRA ETGRQSYSIE AVNEFDPLFE DIYEYCEMQG LDIETLIHEV GAAQMEINFV HGDALSLADQ VFLFKRTVRE AALRHNMYAT FMAKPMEGEP GSAMHIHQSL ADVHTGRNLF AEEGGVVSPM FHSYLAGLQK YTPALMPIFA PYINSYRRLS RFMAAPINVQ WGYDNRTVGF RIPQSTPVAR RIENRIPGVD CNPYLAFAAT LAAGYLGLTQ QLAPTEPIAS DGYDLPYQLP RNLEEGISLM AACTPLAGIL GDKFVKAYLA LKETEYEAFF RVISSWERRH LLLHV
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