Gene BamMC406_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2079 
Symbol 
ID6176984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2323783 
End bp2325120 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content65% 
IMG OID641681847 
Productglutamate--putrescine ligase 
Protein accessionYP_001808776 
Protein GI172061124 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0114961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCG AACTGAGCGA ATTCCTGCGT CAGCACCGCA TCACCGAAGT CGAGGCGATC 
ATTCCCGACA TGGCCGGCAT CGCGCGCGGC AAGATCATTC CGCGCAACAA ATTCGAATCC
GGCGAATCGA TGCGCCTGCC TCAGGCCGTG ATGGTGCAGA CCGTCACCGG CGACTATCCG
GAGGACGGCT CGCTGACCGG CGTGACCGAT CCCGACATGG TGTGCGTGCC CGATCCATCG
ACCATCTGCC TGATTCCGTG GGCCGTCGAT CCGACCGCGC AGGTGATCCA CGATTGCGTG
CATTTCGATG GCTCGCCGGT CGAGATCTCG CCGCGCTACG TGCTGCGCCG CGTGCTCGAC
CTGTACAAGG CGAAGGGCTG GAATCCCGTG GTCGCGCCGG AGCTCGAGTT CTACCTGGTC
GATATGAACG CGGATCCCGA CCTGCCGTTG CGTCCGCCGA TCGGGCGCAC GGGCCGCGCG
GAAACCGGCC GGCAGTCGTA TTCGATCGAG GCGGTCAACG AGTTCGATCC GTTGTTCGAG
GACATCTACG AATACTGCGA GATGCAGGGG CTCGACATCG AGACGCTGAT CCACGAAGTC
GGCGCCGCGC AGATGGAGAT CAACTTCGTG CACGGCGACG CGCTGTCGCT GGCCGACCAG
GTGTTCCTGT TCAAGCGCAC GGTGCGCGAG GCCGCGCTGC GGCACAACAT GTACGCGACC
TTCATGGCCA AGCCGATGGA AGGCGAGCCG GGCTCCGCGA TGCACATCCA CCAGAGCCTC
GCCGATGTGC ACACCGGCCG CAACCTGTTC GCCGAAGAGG GCGGGGTCGT GTCGCCGATG
TTCCACAGCT ATCTCGCGGG ACTGCAGAAG TACACGCCCG CGCTGATGCC GATCTTCGCG
CCGTACATCA ACTCGTATCG CCGGCTGTCG CGCTTCATGG CCGCGCCGAT CAACGTGCAG
TGGGGCTACG ACAACCGCAC GGTCGGCTTC CGCATCCCGC AGTCGACGCC GGTCGCGCGG
CGCATCGAGA ACCGGATTCC GGGCGTCGAC TGCAACCCGT ACCTCGCGTT CGCGGCGACG
CTCGCGGCCG GCTATCTCGG CCTCACCCAG CAGCTCGCGC CGACCGAACC GATCGCGTCC
GACGGCTACG ACCTGCCGTA CCAGCTGCCG CGCAATCTCG AGGAGGGCAT CTCGCTGATG
GCCGCGTGCA CGCCGCTCGC CGGCATTCTC GGCGACAAGT TCGTGAAGGC GTACCTGGCG
CTGAAGGAAA CCGAATACGA AGCGTTCTTC CGCGTGATCA GCTCGTGGGA ACGCCGCCAT
CTGCTGCTGC ACGTGTGA
 
Protein sequence
MQPELSEFLR QHRITEVEAI IPDMAGIARG KIIPRNKFES GESMRLPQAV MVQTVTGDYP 
EDGSLTGVTD PDMVCVPDPS TICLIPWAVD PTAQVIHDCV HFDGSPVEIS PRYVLRRVLD
LYKAKGWNPV VAPELEFYLV DMNADPDLPL RPPIGRTGRA ETGRQSYSIE AVNEFDPLFE
DIYEYCEMQG LDIETLIHEV GAAQMEINFV HGDALSLADQ VFLFKRTVRE AALRHNMYAT
FMAKPMEGEP GSAMHIHQSL ADVHTGRNLF AEEGGVVSPM FHSYLAGLQK YTPALMPIFA
PYINSYRRLS RFMAAPINVQ WGYDNRTVGF RIPQSTPVAR RIENRIPGVD CNPYLAFAAT
LAAGYLGLTQ QLAPTEPIAS DGYDLPYQLP RNLEEGISLM AACTPLAGIL GDKFVKAYLA
LKETEYEAFF RVISSWERRH LLLHV