| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2070 |
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| Symbol | |
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| ID | 6176320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2313015 |
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| End bp | 2314244 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641681837 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001808767 |
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| Protein GI | 172061115 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.840357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA CGAACGCGAC TAACCCGACG AACGCGACAC GCGGCGCACT GGACGGCCTG
AAGGTCGTCG ACCTGAGCCG CGTGCTCGGC GGCCCCTACT GCACGCAGGC GCTCGCCGAC
CACGGCGCGA CGGTGATCAA GATCGAGCCG CCGGACGGCG ACGAGACGCG GGGCTGGGGG
CCGCCGTTCC TCGGCGACAC CGCGTGGTAT TTCATGGGCG TGAACCGTAA CAAGGAAGGG
CTCGCGCTCG ATCTGTCCCG CGACGAAGGG CGCGCGATCC TGTGGCGCCT GCTCGACGAC
GCCGACGTGC TCGTCGAAAA CTTCAAGCCC GGCACGCTCG CGCGCTGGGG GATGGACTAC
GCGCGCGACC TGCGGCCGCG CTTCCCGCGC CTGATCCACT GCGCGGTGAC CGGCTTCGGC
GCGGACGGTC CGCTCGGCGG GCTGCCCGGC TACGACGCGG TGATCCAGGC GATGGCCGGG
TTGATGAGCG TCAACGGCGA GCGCGACGGC GACGCGATGC GCATCGGCTT GCCGATTGTC
GACATGGTCA CGGGGCTCAA CGCGCTTGCC GGCATCCTGC TTGCGATCGC GGAGCGCGAG
AAGAGCGGGC AGGGGCAGTC GATCGACATC GCGCTGTACG ACTGCGGCGT GTCGCTGCTG
CATCCGCACC TGCCGAACTT CTTCGGCTCG GGGCGCGTGC CTGGGCGCAG CGGCAACGCG
CATCCGAACA TCGCGCCGTA CGACAGCTAC CGCACGGCGA CGGTGCCGAT GTTCCTCGCG
GTCGGCAACG ACCGGCAGTT CGCACGGCTC GTCGCGCATC TCGGCGCGCC GGCGCTCGCC
GGCGATCCGC GCTTCGTCGA CAACCGCAGC CGCTGCGCGC ACCGGCCCGA GCTGAAGGCC
GAACTCGAGG CGCGGCTGAC CGCCCATCCG TGCGAGCCGC TCGCGCGCGA CCTGATGGCG
GCGGGCGTGC CGTGCGGGCC GGTGCGCACG GTTGCCGACG TCGCGCGCGA CCCGCATGCG
CTGCACCGCG AGCTGTTCGT CGAGATCGGC GCATATCGCG GCACCGCATC GCCGGTGAAG
CTGTCGCGCA CGCCGGCGAC CTATCGCTCG TCGCCACCGG CGCTCGGCCG CGACACGCGC
GCGGTGCTCG ATCGCCTCGG CGTCGATCCC GCGCTCCAGC AGCAGCTGCT CGACGCCGGC
GTGCTGAAGG TCGCGCCCGA TGAGACGTGA
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| Protein sequence | MNATNATNPT NATRGALDGL KVVDLSRVLG GPYCTQALAD HGATVIKIEP PDGDETRGWG
PPFLGDTAWY FMGVNRNKEG LALDLSRDEG RAILWRLLDD ADVLVENFKP GTLARWGMDY
ARDLRPRFPR LIHCAVTGFG ADGPLGGLPG YDAVIQAMAG LMSVNGERDG DAMRIGLPIV
DMVTGLNALA GILLAIAERE KSGQGQSIDI ALYDCGVSLL HPHLPNFFGS GRVPGRSGNA
HPNIAPYDSY RTATVPMFLA VGNDRQFARL VAHLGAPALA GDPRFVDNRS RCAHRPELKA
ELEARLTAHP CEPLARDLMA AGVPCGPVRT VADVARDPHA LHRELFVEIG AYRGTASPVK
LSRTPATYRS SPPALGRDTR AVLDRLGVDP ALQQQLLDAG VLKVAPDET
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