| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2048 |
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| Symbol | |
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| ID | 6179065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2282959 |
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| End bp | 2285475 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641681814 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001808745 |
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| Protein GI | 172061093 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.991509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACCG ATCGGCTTTT CGCACGCTCG GCGCGACCGT CGGGCCCGCC GGCGGAGTCG
CAGCCGTCCC GTTGGCACCA CGGACCGTGG TGGTCCAACT CCTATTTGCT GACGCCGCTG
CTGTCGATCC TCGTGTTCCT CGTGGTGATG AGCCTGATTC TGTGGAGCCT CAATCGCCGC
GAACAGCAGC AGCAGGAAGA CACCCTCTTC CGTAACGTCG CGTGGGCGCA GCAGCAGATC
CGCCTGTCGA TGACGGGTGC GCAGGAGCAG CTGCAGGCGC TGTCGCGCGA TCTCGCGTCG
GGCCGCCTCG ACCAGAACGC GTTCCAGATG GCCGTCGCGG ACGTGATGCA GACGCATCCG
GAAATCCTCT ATCTGAACTG GTACACCGCG CCCGGCGTGC AGCGCTGGCC GGCCGTGCAC
CCGCCGCTGC TAGGCCAGCG GCTCGCGAAG CCCGGCGACG CGCAGATGCA GGACGCCGTG
CGCGGCGCGT ACGACGAAGC GCGCAGCACG CGCCGCCAGG CCTATTCGCC GCTGATCTAC
GACGACTTCG GCAACGGCTT CATCACGCTG CAGACGCCCG TGATGCGCGG CGACCGCGAA
TATCTCGGCT CGATCGCCGC GGTGTTCTCG GTCGAAGGGA TCCTGAAGCA CGACATCCCG
CAGGAGTTGT CGTCGAAGTA CAAGATCTCG ATCACCGACT CGAACAACCG TGAGCTGTCG
TCCACGTCGA CGCGCCCGCG CCTGCCGCGC GACTCCCATT ACGACCTGCC GCTCGATCCG
CCCGGCCAGG GGCTGACCGT GCGCGTGTAC GCGTTCCCGC AGCTCACGAA CCTGACCAAC
AACACGCTCG TCTGGCTCGT CGCCGGGCTG TCGTGCTTCG TGCTGTGGAG CCTCTGGAGC
CTGTGGAAGC ACACGCGCCA GCGCTTCGAG GCGCAGCAGG CGCTGTACGC GGAGGCGTTC
TTCCGCCGCG CGATGGAAAA TTCGGTGCTG ATCGGCATGC GCGTGCTCGA CATGCATGGC
CGCATCACGC ACGTGAACCC CGCGTTCTGC CGAATGACGG GCTGGGACGA AACCGACCTG
GTCGGCAAGG TCGCGCCGTT CCCGTACTGG CCCCGCGACG CGTATCCGGA AATGCAGCGC
CAGCTCGACA TGACGCTGCG CGGCAAGGCG CCGAGCTCGG GCTTCGAGCT GCGCGTGCGG
CGCAAGAACG GCACGCTGTT CCATGCGCGC CTCTACGTGT CGCCGCTGAT CGACAGCTCG
GGCCGCCAGA CCGGCTGGAT GTCGTCGATG ACCGACATCA CCGAGCCGAA GCGCGCCCGC
GAGGAGCTCG CGGCCGCGCA CGAACGCTTC ACGACGGTGC TCGAAAGCCT CGACGCCGCG
GTGTCGGTGC TCGCCGCCGA CGAAGCCGAG CTGCTGTTCG CGAACCGCTA CTACCGCCAT
CTGTTCGGGA TCCGCCCCGA CGGCCATCTC GAGCTGTCGG GCGGCGGCTT CGACCGCGCG
CAGGCGTCGT CCGACTCGAT CGACATGGTC GACACGTTCG CGGGCCTGCC GGCCGCCGCG
CTGACGAGCA GCACGGCCGA CGCGCAGGAG GTGTACGTCG AGAGCATCCA GAAGTGGTTC
GAGGTGCGCC GCCAGTACAT CCAGTGGGTG GACGGCCACC TCGCGCAGAT GCAGATCGCG
ACCGACATCA CGACCCGCAA GAAGGCGCAG GAACTCGCGC ACCAGCAGGA AGAGAAGCTG
CAGTTCACGA GCCGATTGAT GACGATGGGT GAAATGGCGT CGTCGATTGC TCACGAATTG
AATCAGCCGC TCGCCGCGAT CAACAACTAC TGCTCGGGCA CGCTCGCGCT CGTGAAGAGC
GGCCGCGGCA CGCCCGAGAC GCTGCAGCCC GCGCTGGAAA AGACGGCGCA GCAGGCGCTG
CGCGCGGGGA TGATTGTCAA GCGGATCCGC GAATTCGTGA AGCGCAGCGA GCCGAAGCGC
CAGCCGGCAC GCGTCGCGGA CATCGTCGCC GACGCGGTCG GGCTCGCCGA AATCGAGGCC
AGGAAGCGCA GGATCCGGAT CGTCACGGAA ATCCTCGCAA GAATGCCTAT TATTTATGTC
GACCCCGTGC TTATCGAGCA GGTGCTGATG AACCTGATGA AGAACGCGGC CGAGGCGATG
GCCGACGTGA AGCCGCCGAC GGCGGACGGC GTGATCCGCG TCGTCGCCGA CATCGACGCG
GGTTTCGTCG ACATCCGCGT GATCGACCAG GGTCCGGGCG TCGACGAAGC AACCGCCGAA
CGCCTGTTCG AACCGTTTTA CAGCACCAAG TCCGACGGCA TGGGCATGGG GCTGAACATC
TGCCGTTCGA TCATCGAATC GCATCGGGGG CGTCTGTGGG TGGTCAACAA TGTCGAACCG
GACGGCCGCA TTTCCGGCGC GACATTCCAC TGCAGCCTGC CCATTGGGGA ACCCGCTGAT
CTCGGCCAAG GGGGGCGCGA GGCATCGGCA TCACATACCG TTACGGGAGA ACTATGA
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| Protein sequence | MLTDRLFARS ARPSGPPAES QPSRWHHGPW WSNSYLLTPL LSILVFLVVM SLILWSLNRR
EQQQQEDTLF RNVAWAQQQI RLSMTGAQEQ LQALSRDLAS GRLDQNAFQM AVADVMQTHP
EILYLNWYTA PGVQRWPAVH PPLLGQRLAK PGDAQMQDAV RGAYDEARST RRQAYSPLIY
DDFGNGFITL QTPVMRGDRE YLGSIAAVFS VEGILKHDIP QELSSKYKIS ITDSNNRELS
STSTRPRLPR DSHYDLPLDP PGQGLTVRVY AFPQLTNLTN NTLVWLVAGL SCFVLWSLWS
LWKHTRQRFE AQQALYAEAF FRRAMENSVL IGMRVLDMHG RITHVNPAFC RMTGWDETDL
VGKVAPFPYW PRDAYPEMQR QLDMTLRGKA PSSGFELRVR RKNGTLFHAR LYVSPLIDSS
GRQTGWMSSM TDITEPKRAR EELAAAHERF TTVLESLDAA VSVLAADEAE LLFANRYYRH
LFGIRPDGHL ELSGGGFDRA QASSDSIDMV DTFAGLPAAA LTSSTADAQE VYVESIQKWF
EVRRQYIQWV DGHLAQMQIA TDITTRKKAQ ELAHQQEEKL QFTSRLMTMG EMASSIAHEL
NQPLAAINNY CSGTLALVKS GRGTPETLQP ALEKTAQQAL RAGMIVKRIR EFVKRSEPKR
QPARVADIVA DAVGLAEIEA RKRRIRIVTE ILARMPIIYV DPVLIEQVLM NLMKNAAEAM
ADVKPPTADG VIRVVADIDA GFVDIRVIDQ GPGVDEATAE RLFEPFYSTK SDGMGMGLNI
CRSIIESHRG RLWVVNNVEP DGRISGATFH CSLPIGEPAD LGQGGREASA SHTVTGEL
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