| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2046 |
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| Symbol | |
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| ID | 6177472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2278284 |
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| End bp | 2279918 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681812 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001808743 |
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| Protein GI | 172061091 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG CGATCGAAGT GAAGGTGCCG GATATCGGCG ATTACAAGGA CGTGCCCGTC
ATCGAGGTGC TCGTGAAGGC GGGCGACACG GTCGAGCCCG AGCAGTCGCT CGTCACGCTC
GAGTCGGACA AGGCGACGAT GGACGTGCCG AGCCCGGCAG GCGGCACGGT CAAGGAAGTG
AAGGTCAAGG TGGGCGATTC CGTGTCGGAA GGCTCGCTGA TCATCCTGCT CGAAGGCGGC
GCCGCGGCGC AGGTGAACGG CGCGGCAGCG CCGGCGGCGG CCCCGGCTCC GGCGGCAGCA
CCGGCACCGG CAGCACCGGC CGCCGCGCCG GCAGCATCGG GCGGCACGCT CGAGGTGAAG
GTGCCCGACA TCGGCGACTA CAAGGATGTC CCGGTGATCG AGATCGGCGT GAAGGTCGGC
GATACGGTCG AGAAGGAGCA GTCGCTCGTC ACGCTCGAGT CGGACAAGGC GACGATGGAC
GTGCCGAGCC CGGCCGCCGG CGTCGTGAAG GAAATCAAGG TCAAGGTCGG CGATTCGGTG
TCGGAAGGCA CGCTGATCGT GCTGCTTGAC GCCGCCGGCG CCCCGGCAGC CGCCGCGCCG
CAGGCGAGCG CACCGGCTCC GGCCGCGCCG GCACCTGCCG CAGCACCGGC ACCCGCGCAG
GCTGCGCCGG CACCGGCTGC AGCCGCTCCG GCCGCCGCAC CGTCGGGCGA GTATCGCGCA
AGCCACGCGT CGCCGTCGGT GCGCAAGTTC GCGCGCGAAC TCGGCGTCGA AGTCGCCCGC
GTGCAGGGTA GCGGTCCGAA GGGCCGTATC ACGAAGGAAG ACATCACGGG CTTCGTGAAG
GGTGTGATGA CGGGCCAGCG CGCGGCACCG GCTGCTGCAG CCGCGCCGGC AGGCGGCGGC
GAGCTGAACC TGCTGCCGTG GCCGAAGGTC GACTTCTCGA AGTTCGGCCC GTTCGAAGCG
AAGCCGCTGT CGCGCATCAA GAAGATCTCG GGCGCGAACC TGCATCGCAA CTGGGTGATG
ATCCCGCACG TCACGAACAA TGACGAAGCC GACATCACCG AGCTCGAAGC GCTGCGCGTG
CAGCTGAACA AGGAGCACGA GAAGGCGGGC GTGAAGTTCA CGATGCTCGC GTTCGTGATC
AAGGCGGTCG TCGCCGCGCT GAAGAAGTTC CCGACCTTCA ATGCGAGCCT CGACGGCGAC
AACCTGGTGT TCAAGCAGTA CTACCACGTC GGTTTCGCTG CCGATACGCC GAACGGCCTC
GTCGTGCCGG TGATCCGCGA CGCGGACAAG AAGGGGCTCG TCGACATCGC GAAGGAAATG
GCCGAGCTGT CGAAGGCCGC GCGCGACGGC AAGCTGAAGC CGGACCAGAT GCAAGGCGGC
TGCTTCTCGA TCTCGTCGCT CGGCGGGATC GGCGGCACCA ACTTCACGCC GATCATCAAC
GCGCCGGAAG TCGCAATCCT CGGGTTGTCG CGCGGTCAAA TGAAGCCGGT GTGGGACGGC
AAGCAGTTCG TGCCGCGTCT GACGCTGCCG CTGTCGCTGT CGTATGACCA TCGCGTGATC
GATGGCGCGG AAGCCGCGCG GTTCAATGCG TATCTCGGAG CGTTGCTCGG GGATTTCCGT
CGCATCATTC TTTGA
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| Protein sequence | MSQAIEVKVP DIGDYKDVPV IEVLVKAGDT VEPEQSLVTL ESDKATMDVP SPAGGTVKEV
KVKVGDSVSE GSLIILLEGG AAAQVNGAAA PAAAPAPAAA PAPAAPAAAP AASGGTLEVK
VPDIGDYKDV PVIEIGVKVG DTVEKEQSLV TLESDKATMD VPSPAAGVVK EIKVKVGDSV
SEGTLIVLLD AAGAPAAAAP QASAPAPAAP APAAAPAPAQ AAPAPAAAAP AAAPSGEYRA
SHASPSVRKF ARELGVEVAR VQGSGPKGRI TKEDITGFVK GVMTGQRAAP AAAAAPAGGG
ELNLLPWPKV DFSKFGPFEA KPLSRIKKIS GANLHRNWVM IPHVTNNDEA DITELEALRV
QLNKEHEKAG VKFTMLAFVI KAVVAALKKF PTFNASLDGD NLVFKQYYHV GFAADTPNGL
VVPVIRDADK KGLVDIAKEM AELSKAARDG KLKPDQMQGG CFSISSLGGI GGTNFTPIIN
APEVAILGLS RGQMKPVWDG KQFVPRLTLP LSLSYDHRVI DGAEAARFNA YLGALLGDFR
RIIL
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