Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2045 |
Symbol | |
ID | 6176041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2276235 |
End bp | 2278013 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681811 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001808742 |
Protein GI | 172061090 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCA TCGAAGTCAA GGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC GAAGTCAACG TCAAGCCAGG CGACGTGATC GAAAAAGAAC AAACGCTCAT CACGCTCGAA TCCGATAAAG CCTCCATGGA AGTGCCCAGC GACGTCGCCG GCACAGTCAA GGAAGTCAAG GTCAAGGCCG GCGAGAAAGT CTCGCAAGGC ACCGTCATCG CCATCGTCGA AGCAGCAGCC GGCGACGCCG CACCCGCGAA AGCACCCGAG GCAGCGAAAC CCGCACCGGC TGCGCCCGCT CCGGCCGCAG CCGCTCCCGC AGCCGCTCCC GCAGCCGCGC CGCAAGCCGG CAGCTACAGC GGCGCCGCCG ACATCGAGTG CGACATGCTC GTGCTCGGCG CCGGCCCCGG CGGCTATTCG GCCGCGTTCC GCTCAGCCGA CCTCGGCATG AAGACGGTGC TGGTCGAACG CTACTCGACG CTCGGCGGCG TATGCCTGAA CGTCGGTTGC ATCCCGTCGA AGGCGCTGCT GCACACGGCA CTCGTCATCG ACGAAGCCGC GGCGCTCGCA TCGCACGGCA TCACGTTCGG CAAGCCGGAG GTCGATCTCG ACAAGCTGCG CGACTTCAAG GGCGGCGTCG TCAAGAAACT GACGACGGGC CTCGCCGGCA TGGCGAAGGC GCGCAAGGTC GAAGTCGTCA CGGGCGTCGG CGCATTCGTC GATCCGTATC ACATGGAAGT GCAGGGCGAA AACGGCAAGA AGGTCGTCAA GTTCAAGCAG GCGATCATCG CCGCGGGCTC GCAAGCGGTG AAGCTGCCGT TCATGCCGGA AGACCCGCGC GTCGTCGATT CGACGGGCGC GCTCGAACTG CGCCAACTGC CGAAGCGGAT GCTCGTGATC GGCGGCGGCA TCATCGGCCT CGAAATGGCC ACGGTGTATG CGACGCTCGG CGCCGAGATC GACGTGGTCG AAATGATGGA CGGCCTGATG ATGGGCGCGG ACCGCGATCT CGTGAAGGTC TGGGAAAAGT ACAACGCGAA GCGCTTCGGC AACGTGATGC TGAAGACCAA GACGGTCGGC GCGGAAGCGA AGGAAGAAGG CATCTACGTG AAGTTCGAGG GCGAGAAGGC GCCGGCGGAA GCGCAGCGCT ACGACCTCGT GCTCGTCGCG GTGGGCCGCA GCCCGAACGG CAAGAAGATC GGCGCCGACA AGGCCGGCGT CGCCGTCACC GACCGCGGCT TCATCGATGT CGACAAGCAG ATGCGCACGA ACGTCCCGCA CATCTTCGCG ATCGGCGACG TCGTCGGCCA GCCGATGCTC GCGCACAAGG CCGTGCATGA AGGCCACGTC GCGGCGGAAG CCGCGCACGG CGAGAAGGCG TACTTCGACG CGCTGCAGAT CCCGTCGGTG GCGTACACCG ATCCGGAAGT GGCGTGGGCC GGCAAGACGG AAGACCAGTG CAAGGCCGAA GGCATCAAGT ACGGCAAGGC GGTGTTCCCG TGGGCCGCAT CGGGCCGCGC GATCGCGAAC GGTCGCGACG AAGGCTTCAC GAAGCTGATC TTCGACGAGG AAACCCATCG CGTGATCGGC GGCGGCATCG TCGGCCTGAA CGCGGGCGAC CTGATCAGCG AAGTGTGTCT CGCCGTCGAG ATGGGCGCGG ACGCCGAAGA CATCGGCAAG ACGATCCATC CGCACCCGAC GCTCGGCGAA TCGGTCGGCA TGGCCGCCGA GCTGTACGAA GGCGTGTGTA CCGATCTGCC GCCGCAACGC AAGAAGTAA
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Protein sequence | MSLIEVKVPD IGDFSGVDVI EVNVKPGDVI EKEQTLITLE SDKASMEVPS DVAGTVKEVK VKAGEKVSQG TVIAIVEAAA GDAAPAKAPE AAKPAPAAPA PAAAAPAAAP AAAPQAGSYS GAADIECDML VLGAGPGGYS AAFRSADLGM KTVLVERYST LGGVCLNVGC IPSKALLHTA LVIDEAAALA SHGITFGKPE VDLDKLRDFK GGVVKKLTTG LAGMAKARKV EVVTGVGAFV DPYHMEVQGE NGKKVVKFKQ AIIAAGSQAV KLPFMPEDPR VVDSTGALEL RQLPKRMLVI GGGIIGLEMA TVYATLGAEI DVVEMMDGLM MGADRDLVKV WEKYNAKRFG NVMLKTKTVG AEAKEEGIYV KFEGEKAPAE AQRYDLVLVA VGRSPNGKKI GADKAGVAVT DRGFIDVDKQ MRTNVPHIFA IGDVVGQPML AHKAVHEGHV AAEAAHGEKA YFDALQIPSV AYTDPEVAWA GKTEDQCKAE GIKYGKAVFP WAASGRAIAN GRDEGFTKLI FDEETHRVIG GGIVGLNAGD LISEVCLAVE MGADAEDIGK TIHPHPTLGE SVGMAAELYE GVCTDLPPQR KK
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