| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2043 |
|---|
| Symbol | |
|---|
| ID | 6175984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2273641 |
|---|
| End bp | 2274795 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641681809 |
|---|
| Product | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 |
|---|
| Protein accession | YP_001808740 |
|---|
| Protein GI | 172061088 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCG AATCGTTTTC ACCCCGCAGA TTGTTGCAGA GCATGACGCT CGGCACGGCT
GTGTCGGTCG CTGTCGCCTT GCTGGCGACC ACCGCGTCCG TCACGCCGGT TGACGCCTTT
GCCGCCACTG CGAAGACCCA CCAGGCCGCC AAGAAAGCTG CTTCCTCTTC GTCCGCGAAG
AAGTCGGTGA AGGCCGCCTC CGCCAAATCC GCCGACGTCG CGTCGGCCGA CGCGCCGCGC
GCGAAGGCGT CGCGCAAGCG CATGACGCTC GCGGCAAATG TGCACGGCCA CCGCGGCGCG
GTGCGCAAGG TCGCGTTCCA GCCGCGTCGC CCGACGGTCG GGCAGGCGTT CGGCCTGCAC
GACACGCCGG ATGCGCTCGC GCTGCGCTCG AGTGTCGCGT ACGTCGTCGA CCAGAACACC
GGCGAGCCGC TGTTCGACAA GAATTCGCAC GCCGTCGTGC CGATTGCGTC GATCTCGAAG
CTGATGACGG CAATGGTCGT GCTCGACGCG AAGTCGCCGA TGACCGACCA GCTCGAAGTC
ACCGACGAAG ATCGCGACTA CGAAAAGGGC ACGGGCTCGC GCCTGTCGGT CGGCTCGGTC
CTGTCCCGCG AGGACATGCT CCACATCGCG CTGATGGCAT CGGAAAACCG CGCGGCCGCC
GCGTTGTCGC GCTACTACCC GGGCGGCCGT CCGGCCTTCA TCGCCGCGAT GAACGCGAAG
GCGAAGTCGC TCGGCATGAA CGACACGCAC TTCGAGAATT CGACGGGCCT GTCGAGCTCG
AACGTGTCGA GCGCGCGTGA CCTCGTGAAG ATGGTCAATG CGGCATACCA GTACCCGATG
ATTCGTCAGT TTTCGACCGA TCGGACGTAT GACGTCTATA CGGGCAAGCG GAACCTGGTC
TACAACAGCA CGAACGCGCT GATCCGCGGC AACGGCTCGT GGGACATCGG CCTGCAGAAG
ACGGGCTTCA TCAACGAGGC GGGCGAATGT CTGGTGATGC AGGCGACGAT TCATGGCCGG
CCGATGGTGA TGGTGCTGCT GGATTCGTTC GGCAAGTATT CGCGCTTCGC CGACGCCTCG
CGCCTGCGCA ACTGGCTCGA CGCCGGCGGC GGCGAGCGCC TGACGGCGGC CAACACGGCG
AACGGCGGCA CCTGA
|
|---|
| Protein sequence | MKAESFSPRR LLQSMTLGTA VSVAVALLAT TASVTPVDAF AATAKTHQAA KKAASSSSAK
KSVKAASAKS ADVASADAPR AKASRKRMTL AANVHGHRGA VRKVAFQPRR PTVGQAFGLH
DTPDALALRS SVAYVVDQNT GEPLFDKNSH AVVPIASISK LMTAMVVLDA KSPMTDQLEV
TDEDRDYEKG TGSRLSVGSV LSREDMLHIA LMASENRAAA ALSRYYPGGR PAFIAAMNAK
AKSLGMNDTH FENSTGLSSS NVSSARDLVK MVNAAYQYPM IRQFSTDRTY DVYTGKRNLV
YNSTNALIRG NGSWDIGLQK TGFINEAGEC LVMQATIHGR PMVMVLLDSF GKYSRFADAS
RLRNWLDAGG GERLTAANTA NGGT
|
|---|
| |