Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2042 |
Symbol | |
ID | 6175972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2272729 |
End bp | 2273538 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641681808 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001808739 |
Protein GI | 172061087 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC CCACCCCGGA TTCCAAAACG TCGATCCAAG TGATCGAACG CATGATGCGG CTGCTGGACG CGCTCGCCGC GCACAGCGAC CCCGTCAGCC TGAAGGAGCT TGCGCAGCGC ACGGAGCTGC ATCCGTCGAC CGCGCACCGT ATCCTCAACG ACATGGTGAC CTGCCGCCTC GTCGACCGCT CCGATCCCGG CACGTACCGG CTCGGCATGC GGCTGCTCGA GCTCGGCAAC CTCGTGAAGG CGCGCCTGTC GGTCCGTGAC GCGGCGCTGA TGCCGATGCG CGAGCTGCAC CGCCTGACGG GCCAGACCGT GAACCTGTCG GTACGCCAGG GCGACGAAAT CGTCTATATC GAGCGCGCGT ATTCGGAACG CTCGGGGATG CAGGTCGTCC GCGCGATCGG CGGCCGTGCA CCGCTGCACC TGACGTCGGT CGGCAAGCTG TTCCTCGCGG TCGACGAAAC GTCGCGCGTA CGCGCCTACG CGACGCGCAC CGGGCTGTCC GGCCATACGC AGAACAGCAT TACCGACATC GCGAAGCTCG AGCGCGAGCT GACGCTCGTG CGCCAGCAAT CGTGCGCGCG CGACAACGAG GAACTGGAGC TCGGCGTGCG CTGCATCGCG GCCGGCATCT ATGACGACTC GGGCAAGCTC GTCGCGGGCC TGTCGCTGTC GGCTCCGGCC GACCGCCTGC AGGACGCGTG GCTCGGCCAG TTGAGCCGCA CCGCGCTGAC CATCTCGGAA TCGCTTGGCT ACCGCCCCGC ACCCGCGAAG GAAACGGAAG GACTGCAGCG GCACGCTTGA
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Protein sequence | MSQPTPDSKT SIQVIERMMR LLDALAAHSD PVSLKELAQR TELHPSTAHR ILNDMVTCRL VDRSDPGTYR LGMRLLELGN LVKARLSVRD AALMPMRELH RLTGQTVNLS VRQGDEIVYI ERAYSERSGM QVVRAIGGRA PLHLTSVGKL FLAVDETSRV RAYATRTGLS GHTQNSITDI AKLERELTLV RQQSCARDNE ELELGVRCIA AGIYDDSGKL VAGLSLSAPA DRLQDAWLGQ LSRTALTISE SLGYRPAPAK ETEGLQRHA
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