Gene BamMC406_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2042 
Symbol 
ID6175972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2272729 
End bp2273538 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content68% 
IMG OID641681808 
ProductIclR family transcriptional regulator 
Protein accessionYP_001808739 
Protein GI172061087 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC CCACCCCGGA TTCCAAAACG TCGATCCAAG TGATCGAACG CATGATGCGG 
CTGCTGGACG CGCTCGCCGC GCACAGCGAC CCCGTCAGCC TGAAGGAGCT TGCGCAGCGC
ACGGAGCTGC ATCCGTCGAC CGCGCACCGT ATCCTCAACG ACATGGTGAC CTGCCGCCTC
GTCGACCGCT CCGATCCCGG CACGTACCGG CTCGGCATGC GGCTGCTCGA GCTCGGCAAC
CTCGTGAAGG CGCGCCTGTC GGTCCGTGAC GCGGCGCTGA TGCCGATGCG CGAGCTGCAC
CGCCTGACGG GCCAGACCGT GAACCTGTCG GTACGCCAGG GCGACGAAAT CGTCTATATC
GAGCGCGCGT ATTCGGAACG CTCGGGGATG CAGGTCGTCC GCGCGATCGG CGGCCGTGCA
CCGCTGCACC TGACGTCGGT CGGCAAGCTG TTCCTCGCGG TCGACGAAAC GTCGCGCGTA
CGCGCCTACG CGACGCGCAC CGGGCTGTCC GGCCATACGC AGAACAGCAT TACCGACATC
GCGAAGCTCG AGCGCGAGCT GACGCTCGTG CGCCAGCAAT CGTGCGCGCG CGACAACGAG
GAACTGGAGC TCGGCGTGCG CTGCATCGCG GCCGGCATCT ATGACGACTC GGGCAAGCTC
GTCGCGGGCC TGTCGCTGTC GGCTCCGGCC GACCGCCTGC AGGACGCGTG GCTCGGCCAG
TTGAGCCGCA CCGCGCTGAC CATCTCGGAA TCGCTTGGCT ACCGCCCCGC ACCCGCGAAG
GAAACGGAAG GACTGCAGCG GCACGCTTGA
 
Protein sequence
MSQPTPDSKT SIQVIERMMR LLDALAAHSD PVSLKELAQR TELHPSTAHR ILNDMVTCRL 
VDRSDPGTYR LGMRLLELGN LVKARLSVRD AALMPMRELH RLTGQTVNLS VRQGDEIVYI
ERAYSERSGM QVVRAIGGRA PLHLTSVGKL FLAVDETSRV RAYATRTGLS GHTQNSITDI
AKLERELTLV RQQSCARDNE ELELGVRCIA AGIYDDSGKL VAGLSLSAPA DRLQDAWLGQ
LSRTALTISE SLGYRPAPAK ETEGLQRHA