| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2022 |
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| Symbol | |
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| ID | 6178992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2253431 |
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| End bp | 2254219 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681788 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001808719 |
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| Protein GI | 172061067 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.602642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.212066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATCG ATACGCATTG CCATCTCGAC GCCGGCGAAT TCGATGCCGA CCGCGACGCG
GTCGCCGAGG CGGCGCGCAC GGCCGGCGTG TCGCGCATCG TGATCCCGAG CGTCGGGCGC
GACAATTTCA CGACGGTGCG CGAACTCGCG CAGCGCACGC CCGGTGCGGC CTATGCGCTC
GGCATCCACC CGATGTTTAC GCCGCAGGCG CACGACGCCG ATCTCGACCG GCTGCGCATG
GAGATCGAGG CGAGCCTCGA CGATCCGCGC TTCGTCGCGA TCGGCGAGAT CGGTCTCGAC
TACTTCGTGC CGGGGCTCGA CGAAGAACGG CAGCAATTCT TCTATCAGGG GCAACTGAAG
CTCGCGCGCG AATTCGACCT GCCGGTGCTG TGCCACGTAC GCAAGTCGCA GGACCGCGTG
CTCGCCGGGT TGCGTCGCTT CGGTGTGCGG CGCGGCATCG CGCATGCGTT CAACGGCAGC
TTTCAGCAGG CCGATGCGTA TCTCGCGCAG GGGCTGCACC TCGGCTTCGG CGGCAACGTG
ACGTTCGGAC GCGCGTTGCA GATCCGCCGG CTCGCCACGC AGTTGCCGCT CGACGCGATC
GTCGTCGAGA CGGACGCGCC CGACATCGCG CCCGAGTGGG CGTACAAGTC CCGCAACACG
CCCGGCCAGG TGCCGCGCAT CGGCGCCGTG CTCGCCGAAC TGCGCGGGAT CGATGCTCAC
TCCTTGTGCC TATCCACAAC GGCTAACGCG CTCGCCGCGC TGCCGCGCCT CGCACTTTCG
TCCGCATAA
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| Protein sequence | MWIDTHCHLD AGEFDADRDA VAEAARTAGV SRIVIPSVGR DNFTTVRELA QRTPGAAYAL
GIHPMFTPQA HDADLDRLRM EIEASLDDPR FVAIGEIGLD YFVPGLDEER QQFFYQGQLK
LAREFDLPVL CHVRKSQDRV LAGLRRFGVR RGIAHAFNGS FQQADAYLAQ GLHLGFGGNV
TFGRALQIRR LATQLPLDAI VVETDAPDIA PEWAYKSRNT PGQVPRIGAV LAELRGIDAH
SLCLSTTANA LAALPRLALS SA
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