| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2020 |
|---|
| Symbol | |
|---|
| ID | 6178991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2250004 |
|---|
| End bp | 2250849 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641681786 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001808717 |
|---|
| Protein GI | 172061065 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0898087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGGACA TCATCCACTT CTCGCATGCG AACGGTTTTC CGGCGTCGAC GTACCGGACG
ATCTTCGCCG AGCTGGCAGA CGATTACGAG CTGCGCTACA TCGAACGCAT CGGTCACGAT
CGCCGCTACC CGGTGACGCG CGACTGGCCG CATCTCGTCG AACAGCTGCT CGACGACATC
GGCGGCCGCT ACGAGCGCCC GGTCTGGCTC GTCGGCCATT CGCTCGGCGG CTACCTGTCG
CTGATGGCCG CGCTGAAAAA GCCGCACTGG GTGCGCGGCG TGGTGATGAT CGATTCGCCG
ATCATCGCGG GCTGGCGCGC CGGCGCGCTG CGCGCGAGCC AGTGGGCCGG GCTCGACGAG
CGGCTGTCGC CGGCGGCCGC GACCCGCAAC CGGCGCACGC GCTGGACGAG CCGCGACGAA
GTCTGGCGGC ACTTCCACGA GAAACCGGCG TTCGCCCGCT GGGACGAACG GATGCTGTCC
GACTACATCG ACTACGGCAT CCCGCAGGCG GGCGCCGACG GCGAACGCAC GCTCGCCTTC
GACCGCCAGG TCGAATACCT GATCTACCGG ACCTTGCCGC ACACGCTCGG CCCGCGGCTC
GCGCACGGCG CGCCGGTGCC GCTCGGCTTT CTCGCCGGCA CGCGCTCGCG CGAAGTGCGG
CAGGTCGGGC TCGATGCGAC GCGCCGCGCG GCGCGCGGGC GCATCGAATG GCTCGAGGGC
AGCCACCTGT TCCCGATGGA GCGGCCGATC GAGACGGCCC GCGCATTGCA GCGGATGCTG
AATTCGCTGA AGGCGGCGGA GGGCGGCGTG CCGCGCGACA GCGTGGCGCT CGCGAAGCGC
GCCTGA
|
|---|
| Protein sequence | MKDIIHFSHA NGFPASTYRT IFAELADDYE LRYIERIGHD RRYPVTRDWP HLVEQLLDDI
GGRYERPVWL VGHSLGGYLS LMAALKKPHW VRGVVMIDSP IIAGWRAGAL RASQWAGLDE
RLSPAAATRN RRTRWTSRDE VWRHFHEKPA FARWDERMLS DYIDYGIPQA GADGERTLAF
DRQVEYLIYR TLPHTLGPRL AHGAPVPLGF LAGTRSREVR QVGLDATRRA ARGRIEWLEG
SHLFPMERPI ETARALQRML NSLKAAEGGV PRDSVALAKR A
|
|---|
| |