| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1998 |
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| Symbol | |
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| ID | 6178838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2227815 |
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| End bp | 2230472 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681764 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001808695 |
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| Protein GI | 172061043 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000368418 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACGC TGTCGCCCGA GGCCTTCGCT GGCCACACCC CGATGATGCA GCAGTACCTG
CGCATCAAGG CCGATCACCC CGACACGCTC GTCTTCTACC GGATGGGCGA CTTCTACGAG
CTGTTCTTCG AAGACGCGGA GAAAGCCGCG CGCCTGCTCG ACTTGACCCT CACGCAACGC
GGCGCATCGG CCGGCACGCC GATCAAGATG GCCGGCGTCC CGCACCACGC GGTGGAACAG
TATCTGGCGA AGCTCGTGAA GATGGGCGAA TCGGTGGCGA TCTGCGAGCA GATCGGCGAC
CCGGCCACAT CGAAGGGGCC GGTCGAGCGC AAGGTCGTGC GCGTCGTCAC GCCCGGCACA
CTGACCGATG CCGCCCTGCT GTCCGACAAG AACGACGTCT ACCTGCTTGC AATGTGCACG
GGCCACAACA AGCGTGGCGT CGCGGTCAAC ATCGGCCTCG CGTGGCTGAA CCTCGCGAGC
GGCGCACTGC GCCTCGCCGA AATCGAACCC GACCAGCTCG GCGCCGCGCT CGAACGCATC
CGGCCGGCCG AAATCCTGAC GGCGGACGGC GCAACCGACA CGGTGCCCGC CGGCGCCGGC
GCGATCAAGC GCGTACCGGC ATGGCACTTC GACATCGCCT CGGGCACGCA GCGCCTGTGC
GACCAGCTCG ACGTCGCGGG CCTCGATGGC TTCGGCGCGC ATTCGCTGAC GAGCGCATGC
GGCGCCGCGG GCGCGCTGCT GCTGTACGCG GCGGCCACGC AGGGCCAGCA ACTGCGTCAC
GTGCGCAGCC TGAAGGTCGA GAACGAAACG GAATACATCG GGCTCGATCC GGCGACACGC
CGCAACCTCG AGCTGACCGA AACGCTGCGC GGCACCGAAT CGCCGACGCT GTACTCGCTG
CTCGACACGT GCTGCACGAC GATGGGCAGC CGCCTGCTGC GTCACTGGCT GCATCACCCG
CCGCGCGCGT CGGTCGCCGC GCAATCGCGC CAGCAAGCGA TCGGCGCACT ACTCGATGCG
CCCGCGGACG CGAGCCTCGA CGCACTGCGC AGCGCGCTGC GCCAGATCGC CGACGTCGAA
CGGATCACCG GGCGTCTCGC GCTGCTGTCC GCGCGGCCGC GCGACCTGTC GAGCCTGCGC
GATACGTTCG CCGCGCTGCC GGCACTGCGT GAGCGCATCA GCGCGATCGT CGCGAACGCG
GATGCGCTCA CGCGCGTCGA CGCGGCGCTC GCACCGCCCG CCGAATGCCT CGACCTGCTG
ACGAGCGCGA TCGCCCCCGA GCCGGCCGCG ATGGTGCGCG ACGGCGGCGT GATCGCGCGC
GGCTACGACG CGGAGCTCGA CGAGCTGCGC GACATCTCCG AGAATTGTGG CCAGTTCCTG
ATCGATCTCG AAGCGCGCGA GCGCACCCGC ACGGGCATCG CGAACCTGCG CGTCGAATAC
AACAAGGTGC ACGGCTTCTA CATCGAGGTC ACGCGCGGCC AGACCGACAA GGTGCCCGAC
GACTATCGCC GCCGCCAGAC GCTTAAGAAT GCCGAGCGCT ACATCACGCC CGAACTGAAG
ACCTTCGAGG ACAAGGCACT GTCCGCGCAG GAACGCGCAC TGGCCCGCGA GCGCGCGCTG
TACGACGGCG TGCTGCAGGC GCTGCTGCCG TTCATTCCCG AATGCCAGCG CGTCGCGTCG
GCGCTCGCGG AGCTCGACGT GCTCGCCGCG TTCGCCGAGC GTGCGCGCAC GCTCGACTGG
GTCGCACCGA CCTTCACCGA CGAAATCGGC ATCGAGATCG AACAGGGTCG CCATCCGGTC
GTCGAAGCGC AGGTCGAGCA GTTCATCGCG AACGACTGCC GGTTCGGCGC CGAGCGCAAG
CTGTTGCTGA TCACCGGCCC GAACATGGGT GGTAAGTCGA CGTTCATGCG CCAGACGGCG
CTGATCGCGC TGATGGCGTA TGTCGGCAGC TACGTGCCCG CGAAGTCGGC CTGCTTCGGC
CCGATCGACC GCATCTTCAC GCGGATCGGC GCGGCCGACG ACCTCGCCGG CGGCCGCTCG
ACCTTCATGG TCGAGATGAC CGAAGCCGCC GCGATCCTCA ACGACGCGAC GCCGCAAAGC
CTCGTGCTGA TGGATGAAAT CGGCCGCGGC ACGTCGACGT TCGACGGCCT CGCGCTTGCA
TGGGCCATCG CGCGTCACCT GCTCGCGCAA AACGGCTGCT ACACGCTGTT CGCGACGCAC
TACTTCGAGC TGACGCAACT GCCGGCCGAA TTCCCGCAAG CGGCGAACGT CCACCTGTCG
GCCGTCGAGC ACGGCCACGG CATCGTGTTC CTGCACGCGG TCAACGAAGG TCCGGCGAAC
CAGAGCTACG GGCTGCAGGT TGCGCAGCTC GCGGGCGTAC CGGCGCCGGT GATCCGTGCC
GCACGCAAGC ATCTCGCGTA TCTCGAACAG CAGTCGGCCA CGCAGAACAC GCCGCAGCTC
GATCTCTTCA GCGCGCCGCC CGCCGCGGCC GACGAACTCG AATGCGCGGA TGCGCCGGCG
GTGTCCGCCA TCCCGCACCC GGCGCTCGAA AAGCTGCGCG ACATCGATCC CGACGACCTC
AAGCCGCGCG ACGCGCTCGA CCTGCTGTAC GAACTGCGCA CGCTCGTCCG CTCGCACGAT
GCCGACGGGC ACGCATAA
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| Protein sequence | MTTLSPEAFA GHTPMMQQYL RIKADHPDTL VFYRMGDFYE LFFEDAEKAA RLLDLTLTQR
GASAGTPIKM AGVPHHAVEQ YLAKLVKMGE SVAICEQIGD PATSKGPVER KVVRVVTPGT
LTDAALLSDK NDVYLLAMCT GHNKRGVAVN IGLAWLNLAS GALRLAEIEP DQLGAALERI
RPAEILTADG ATDTVPAGAG AIKRVPAWHF DIASGTQRLC DQLDVAGLDG FGAHSLTSAC
GAAGALLLYA AATQGQQLRH VRSLKVENET EYIGLDPATR RNLELTETLR GTESPTLYSL
LDTCCTTMGS RLLRHWLHHP PRASVAAQSR QQAIGALLDA PADASLDALR SALRQIADVE
RITGRLALLS ARPRDLSSLR DTFAALPALR ERISAIVANA DALTRVDAAL APPAECLDLL
TSAIAPEPAA MVRDGGVIAR GYDAELDELR DISENCGQFL IDLEARERTR TGIANLRVEY
NKVHGFYIEV TRGQTDKVPD DYRRRQTLKN AERYITPELK TFEDKALSAQ ERALARERAL
YDGVLQALLP FIPECQRVAS ALAELDVLAA FAERARTLDW VAPTFTDEIG IEIEQGRHPV
VEAQVEQFIA NDCRFGAERK LLLITGPNMG GKSTFMRQTA LIALMAYVGS YVPAKSACFG
PIDRIFTRIG AADDLAGGRS TFMVEMTEAA AILNDATPQS LVLMDEIGRG TSTFDGLALA
WAIARHLLAQ NGCYTLFATH YFELTQLPAE FPQAANVHLS AVEHGHGIVF LHAVNEGPAN
QSYGLQVAQL AGVPAPVIRA ARKHLAYLEQ QSATQNTPQL DLFSAPPAAA DELECADAPA
VSAIPHPALE KLRDIDPDDL KPRDALDLLY ELRTLVRSHD ADGHA
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