Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1988 |
Symbol | |
ID | 6178725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2217258 |
End bp | 2218031 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681754 |
Product | serine O-acetyltransferase |
Protein accession | YP_001808685 |
Protein GI | 172061033 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1045] Serine acetyltransferase |
TIGRFAM ID | [TIGR01172] serine O-acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.436626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCACTA GACTGCGCGA AGACGTTGCG ACGATTCGCG AGCGGGATCC CGCCGCTCGC AGTGCCTGGG AAGTGCTGAC CTGTTATCCG GGGCTGCACG CGCTCGTGCT CCATCGTTTC GCCCATGCAT GCTGGCGCGC GAAACGCTAC TGGCTCGCCC GCTTCGCGTC GCAGGCCGGA CGCTTCCTGA CGGGGATCGA GATTCACCCG GGCGCGACGA TCGGCCGGCG CGTGTTCATC GATCACGGGA TGGGTGTCGT GATCGGCGAA ACCGCGATCA TCGGCGACGA CTGCACGATC TATCAGGGCG TGACGCTCGG CGGCACGTCG CTCACGCGCG GCGCGAAGCG CCATCCGACG CTCGAGGCCG GCGTGATCGT CGGCGCGGGC GCGAAGGTGC TTGGCGGTTT CACGGTCGGC GCGGGTGCGA AGATCGGCTC GAACGCGGTC GTCGTGAAGC CGGTGCCGGC AGGCGGCACC GCGGTCGGCA ATCCGGCGCG CATCGTGATG CCGGCGCAAC CGAAGCCGCA GCCCGAGCGC GCCGCGTTCT GCGCATACGG GATCACGCCG AACGCGGACG ACCCGATGTC GCTCGCGATT CACGGGCTGA TCGATCACGC CGCGAAGGAA AGCCGGCGCG TCGACGAGAT CGTCGCGGCG CTGGAGCAAC TCGGCACGCA TCTGGAAACG CTGCAGGGCG CGGACGCGGC GCGTCTCGAT TTGCGCAGGC TGTCGGCGGT GCTGGAAGGC AAGGCGGTCG AGCGCCAGTC GTAA
|
Protein sequence | MFTRLREDVA TIRERDPAAR SAWEVLTCYP GLHALVLHRF AHACWRAKRY WLARFASQAG RFLTGIEIHP GATIGRRVFI DHGMGVVIGE TAIIGDDCTI YQGVTLGGTS LTRGAKRHPT LEAGVIVGAG AKVLGGFTVG AGAKIGSNAV VVKPVPAGGT AVGNPARIVM PAQPKPQPER AAFCAYGITP NADDPMSLAI HGLIDHAAKE SRRVDEIVAA LEQLGTHLET LQGADAARLD LRRLSAVLEG KAVERQS
|
| |