Gene BamMC406_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1988 
Symbol 
ID6178725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2217258 
End bp2218031 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID641681754 
Productserine O-acetyltransferase 
Protein accessionYP_001808685 
Protein GI172061033 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.436626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACTA GACTGCGCGA AGACGTTGCG ACGATTCGCG AGCGGGATCC CGCCGCTCGC 
AGTGCCTGGG AAGTGCTGAC CTGTTATCCG GGGCTGCACG CGCTCGTGCT CCATCGTTTC
GCCCATGCAT GCTGGCGCGC GAAACGCTAC TGGCTCGCCC GCTTCGCGTC GCAGGCCGGA
CGCTTCCTGA CGGGGATCGA GATTCACCCG GGCGCGACGA TCGGCCGGCG CGTGTTCATC
GATCACGGGA TGGGTGTCGT GATCGGCGAA ACCGCGATCA TCGGCGACGA CTGCACGATC
TATCAGGGCG TGACGCTCGG CGGCACGTCG CTCACGCGCG GCGCGAAGCG CCATCCGACG
CTCGAGGCCG GCGTGATCGT CGGCGCGGGC GCGAAGGTGC TTGGCGGTTT CACGGTCGGC
GCGGGTGCGA AGATCGGCTC GAACGCGGTC GTCGTGAAGC CGGTGCCGGC AGGCGGCACC
GCGGTCGGCA ATCCGGCGCG CATCGTGATG CCGGCGCAAC CGAAGCCGCA GCCCGAGCGC
GCCGCGTTCT GCGCATACGG GATCACGCCG AACGCGGACG ACCCGATGTC GCTCGCGATT
CACGGGCTGA TCGATCACGC CGCGAAGGAA AGCCGGCGCG TCGACGAGAT CGTCGCGGCG
CTGGAGCAAC TCGGCACGCA TCTGGAAACG CTGCAGGGCG CGGACGCGGC GCGTCTCGAT
TTGCGCAGGC TGTCGGCGGT GCTGGAAGGC AAGGCGGTCG AGCGCCAGTC GTAA
 
Protein sequence
MFTRLREDVA TIRERDPAAR SAWEVLTCYP GLHALVLHRF AHACWRAKRY WLARFASQAG 
RFLTGIEIHP GATIGRRVFI DHGMGVVIGE TAIIGDDCTI YQGVTLGGTS LTRGAKRHPT
LEAGVIVGAG AKVLGGFTVG AGAKIGSNAV VVKPVPAGGT AVGNPARIVM PAQPKPQPER
AAFCAYGITP NADDPMSLAI HGLIDHAAKE SRRVDEIVAA LEQLGTHLET LQGADAARLD
LRRLSAVLEG KAVERQS