Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1986 |
Symbol | |
ID | 6178671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2215882 |
End bp | 2216373 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641681752 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_001808683 |
Protein GI | 172061031 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.167041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.389546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAAC TGCACACGAA CCACGGCGTA ATCAAGCTCG AGCTGGACGC CGCGAAGGCA CCGAAGACGG TCGAGAACTT CCTCAACTAC GTGAAGAAGG GCCACTATGA CGGTACGGTG TTCCACCGCG TGATCAACGG CTTCATGATT CAAGGCGGCG GCTTCGAGCC GGGCCTGAAG CAGAAGCCGA CCGACGCGCC GATCGACAAC GAAGCGAACA ACGGCCTGAA GAACGACAAC TACACGGTCG CGATGGCGCG CACGAACGAT CCGCACTCGG CGACCGCACA ATTCTTCATC AACGTGAACG ACAACGACTT CCTGAACCAC TCGTCGCCGA CGCCGCAGGG CTGGGGCTAC GCGGTGTTCG GCAAGGTCGT CGAAGGCCAG GACGTGGTCG ACAAGATCAA GGGCGTCAAG ACGGGCAACG CGGGCTTCCA CCAGGACGTG CCGACCGATG ATGTCGTGAT CGAAAAGGCC GTGGTGGTCT GA
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Protein sequence | MVELHTNHGV IKLELDAAKA PKTVENFLNY VKKGHYDGTV FHRVINGFMI QGGGFEPGLK QKPTDAPIDN EANNGLKNDN YTVAMARTND PHSATAQFFI NVNDNDFLNH SSPTPQGWGY AVFGKVVEGQ DVVDKIKGVK TGNAGFHQDV PTDDVVIEKA VVV
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