Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1985 |
Symbol | |
ID | 6178626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2215218 |
End bp | 2215793 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681751 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_001808682 |
Protein GI | 172061030 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.659579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.529934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTC TGTTGCTGGC GCTTGGCGGC GCCGCCCTTC TCGCGACCGC GCCTGCTTTC GCGCAATCGG CTACCGCGCA CCCCGTCGTG CAGCTGAAGA CCTCGCAGGG CGACATCCGC GTCGAGCTCT ACCCGGAAAA GGCGCCGAAG ACGGTCGCCA ACTTCCTCGA TTACGTGAAG GCCGGCCAGT ACAACGGCAC GATCTTCCAT CGCGTGATCA AGGGCTTCAT GATCCAGGGC GGCGGCTACA AGACCAACTT CGAGGAGAAG CCGACCCGCG CGCCGATCCC GCTGGAAAGC CGCAATGGTC TGAAGAACCT GACGGGCACG ATCGCGATGG CGCGTACCAG CGATCCGAAC TCCGCCACCG CGCAGTTCTT CATCAACACG GTCGACAACA GCGGCCTCGA CTACCCGAAC CCGGACGGCA ACGGCTATGC GGTGTTCGGC AAGGTCGTGT CCGGCCTCGA CGTCGTGAAG AAGATCGAAG GCGTGGCGAC GACCTCGCGC GGCCCGATGC AGGACGTGCC GGCCCAGCCG GTCTTGATCG AATCGGCCAG CATCGTCTCG AAATAA
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Protein sequence | MKRLLLALGG AALLATAPAF AQSATAHPVV QLKTSQGDIR VELYPEKAPK TVANFLDYVK AGQYNGTIFH RVIKGFMIQG GGYKTNFEEK PTRAPIPLES RNGLKNLTGT IAMARTSDPN SATAQFFINT VDNSGLDYPN PDGNGYAVFG KVVSGLDVVK KIEGVATTSR GPMQDVPAQP VLIESASIVS K
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