Gene BamMC406_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1985 
Symbol 
ID6178626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2215218 
End bp2215793 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content64% 
IMG OID641681751 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_001808682 
Protein GI172061030 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.659579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.529934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC TGTTGCTGGC GCTTGGCGGC GCCGCCCTTC TCGCGACCGC GCCTGCTTTC 
GCGCAATCGG CTACCGCGCA CCCCGTCGTG CAGCTGAAGA CCTCGCAGGG CGACATCCGC
GTCGAGCTCT ACCCGGAAAA GGCGCCGAAG ACGGTCGCCA ACTTCCTCGA TTACGTGAAG
GCCGGCCAGT ACAACGGCAC GATCTTCCAT CGCGTGATCA AGGGCTTCAT GATCCAGGGC
GGCGGCTACA AGACCAACTT CGAGGAGAAG CCGACCCGCG CGCCGATCCC GCTGGAAAGC
CGCAATGGTC TGAAGAACCT GACGGGCACG ATCGCGATGG CGCGTACCAG CGATCCGAAC
TCCGCCACCG CGCAGTTCTT CATCAACACG GTCGACAACA GCGGCCTCGA CTACCCGAAC
CCGGACGGCA ACGGCTATGC GGTGTTCGGC AAGGTCGTGT CCGGCCTCGA CGTCGTGAAG
AAGATCGAAG GCGTGGCGAC GACCTCGCGC GGCCCGATGC AGGACGTGCC GGCCCAGCCG
GTCTTGATCG AATCGGCCAG CATCGTCTCG AAATAA
 
Protein sequence
MKRLLLALGG AALLATAPAF AQSATAHPVV QLKTSQGDIR VELYPEKAPK TVANFLDYVK 
AGQYNGTIFH RVIKGFMIQG GGYKTNFEEK PTRAPIPLES RNGLKNLTGT IAMARTSDPN
SATAQFFINT VDNSGLDYPN PDGNGYAVFG KVVSGLDVVK KIEGVATTSR GPMQDVPAQP
VLIESASIVS K