Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1982 |
Symbol | |
ID | 6178721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2211917 |
End bp | 2212780 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681748 |
Product | HhH-GPD family protein |
Protein accession | YP_001808679 |
Protein GI | 172061027 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.963922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.532764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGG CAAGAAAAGC GCCGGTCAGG CGCGCGACCC AGGTCGCCGC GCGTCCGGCA GCCAGGCGCG CGCCGGCGGC GAAGACGGAC GCGACGCGCG CCGTGCCGAA CGGCGCGCTC AACGGTCATG CGAGGCCCGC GCGCGCGAAG AGCGCGGACG CGGCGCAGCC GGAGGCCGCG ATGGCGGCCG CCGACGCGGT GCGCAAGGTG CGAGCATCCG AGGTGGCAGC CGACGGCGCC GATGGCGTTG CGCGTCCTGC CTACTGGGAC AAGGCGTGCG CCGATCTCGT CAAGCGCGAC CGCATCCTGA AGAAACTGAT CCCGAAGTTC GGTCCCGCGC ATCTCGTGAA GCGCGGCGAC CCGTTCGTCA CGCTCGCGCG TTCGGTCGTC GGCCAGCAGA TCTCGGTGCC GTCCGCGCAG GCGCTGTGGG CGTGCATTGA AGATGCGTGT CCGAAACTCG CGCCGCAGCC GGTCATCCGG CTCGGCGCGG ACAAGCTGAT CGCATGCGGG CTGTCGAAGC GCAAGACGGA ATACATTCTC GATCTCGCGC AACACTTCGT GTCCGGCGCG CTGCACGTCG ACAAATGGAC GTCGATGGAC GACGAGGACG TGATCGCTGA ACTCACGCAG ATCCGCGGCA TCAGTCGCTG GACGGCCGAG ATGTTCCTGA TCTTCAACCT GTCGCGGCCG GACGTGCTGC CGCTCGACGA TCCGGGCCTG ATCCGCGCGA TCAGCGTCAA TTACTTCAGC GGGGAGCCCG TCACGCGCAG CGAGGCGCGC GAGGTGGCCG CCAACTGGGA GCCGTGGCGT ACCGTCGCGA CCTGGTACAT GTGGCGCAGC CTCGACGCGC CCGACGCCGA TTGA
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Protein sequence | MATARKAPVR RATQVAARPA ARRAPAAKTD ATRAVPNGAL NGHARPARAK SADAAQPEAA MAAADAVRKV RASEVAADGA DGVARPAYWD KACADLVKRD RILKKLIPKF GPAHLVKRGD PFVTLARSVV GQQISVPSAQ ALWACIEDAC PKLAPQPVIR LGADKLIACG LSKRKTEYIL DLAQHFVSGA LHVDKWTSMD DEDVIAELTQ IRGISRWTAE MFLIFNLSRP DVLPLDDPGL IRAISVNYFS GEPVTRSEAR EVAANWEPWR TVATWYMWRS LDAPDAD
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