Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1980 |
Symbol | |
ID | 6178676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2209396 |
End bp | 2210802 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641681746 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_001808677 |
Protein GI | 172061025 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCCAC CGACCGAACT CTTCGCCGAC CGCGTCGTAC TCGATGCGGT CGGCGTTGCG CTTGCCGATC TGCCGGCCGA TGCGCGCATC GCGATCGCGT ACAGCGGCGG CCTCGACTCG ACCGTGCTGC TCGATGCGGC CGTGCGCGTG GCCGGCGCGT CGCGCTGCGT CGCGCTGCAC GTGCATCACG GCCTGAGTGC GAACGCCGAC GCGTGGGTTG CGCATGCGCA AGCGACGGCC GAGCGACTCG GTGTCACGTT CGAATCGGAG CGTGTCGACG TGCCGCGCGA CAGCGGCCTC GGCATCGAGG CGAGCGCCCG CGAGCGTCGC TATGCGGCGC TCGATGCGAT GTGCGAACGT CACGGCGTGG CGGCGCTGTG GGTCGCGCAG CACGCGGACG ACCAGGCCGA GACCGTGCTG CTGCAACTGT TGCGCGGCGC GGGCATCGCC GGCCTGGCCG CAATGGCGCC GCGCTATCGC CCCGACGGCG CGAGCGTCGA GCGCGTGCGG CCGTTCCTGC GATTGTTGCG TGCCCAACTG GAGCGCTACG CGGCGCAGCG TGAGCTCGCG TGGATCGACG ACGAATCGAA CGCCGACACG CGCTACGCGC GCAATGCGTT GCGCATCGAC GTGCTGCCCG CGCTCGCCAT GCACTTCCCC GGTTTTCGCG ATGCGCTGGG CCGTGCGGCC CAGCATGCGG CCGCCGCGCA GCGGCTGCTC GACGACCTGG CCGAACTGGA TTTCGCCGGC GCCGCGCGCG ACGACGGCCG CGCGCTGTCG CGCGAAGCGC TGGTCGCGTT CGACGACACG CGCGGCGCGA ACCTGCTGCG TTTCTGGATG CGCCGACTCG GCTTGCCCGG TGCGTCGGCA GGCCGGCTCG CGAACATGAT GCGGCAACTG CGCGATGCGC ACGACGCGCA TGCGCTGCGG GTCGATCACG CGGGGCAGTG CCTGCGGCTC TATCGGGATG TCGTGTACTG GGAGGCCGGC GACAGTGCCG ACCCGGCCGA CGATGGCACC GGGATGCCGC GTCCGGAGGC CTCGCTCGCT TGGGACGGAC AGGAAGTCTG GCACGTGCCG GCGTGGCGCG GCACGTTCGT GTTCGGGCCG GCCGAGGCCG GCAGCGACGG GGCGGTGCCG GAGGCGCTGC TGCGCGGTGC AACGCTCGTC GTGCGCGCCC GGGCGGGCGG CGAGCGGCTG CGTACGTCGC CCGGCGGCCC GGGACGCACG CTGAAGAACC TGTTCCAGGA GCGCGGCGTG CCGGCCTGGC AGCGCGACGT GCCGCTGCTG TTCGCGGGCG ACCGGCTCGT CTACGTCCCG CGGCTCGGCG TGAATCATGG CGATGGGCTT GCCGGCGAAG GCGGGTGGCG CCGGATCGAG TGGCGTCCCG ACTTGCTGAT CGCGTAG
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Protein sequence | MIPPTELFAD RVVLDAVGVA LADLPADARI AIAYSGGLDS TVLLDAAVRV AGASRCVALH VHHGLSANAD AWVAHAQATA ERLGVTFESE RVDVPRDSGL GIEASARERR YAALDAMCER HGVAALWVAQ HADDQAETVL LQLLRGAGIA GLAAMAPRYR PDGASVERVR PFLRLLRAQL ERYAAQRELA WIDDESNADT RYARNALRID VLPALAMHFP GFRDALGRAA QHAAAAQRLL DDLAELDFAG AARDDGRALS REALVAFDDT RGANLLRFWM RRLGLPGASA GRLANMMRQL RDAHDAHALR VDHAGQCLRL YRDVVYWEAG DSADPADDGT GMPRPEASLA WDGQEVWHVP AWRGTFVFGP AEAGSDGAVP EALLRGATLV VRARAGGERL RTSPGGPGRT LKNLFQERGV PAWQRDVPLL FAGDRLVYVP RLGVNHGDGL AGEGGWRRIE WRPDLLIA
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