Gene BamMC406_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1977 
Symbol 
ID6178553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2204310 
End bp2205161 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content63% 
IMG OID641681742 
Productubiquinol oxidase, subunit II 
Protein accessionYP_001808674 
Protein GI172061022 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR01433] cytochrome o ubiquinol oxidase subunit II 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG GCGCGGCGCT AAGCCTGTCA GGCTGTAAGT TAGATGTACT AAATCCGAAA 
GGAAGTGTCG GCGCTGCCGA AAAGGCGCTG ATTGCAACCT CGACATGGGC GATGCTGGTC
GTCGTCGTGC CGGTGATCCT GCTCACGCTG TGGTTCGCGT GGCGTTACCG CGCATCGAAC
CGCAACGCCA CCTATGCGCC GAACTGGTCG CATTCGACCG CGATCGAGGT CGTGATTTGG
ACGGTGCCGA CGCTGATCAT CCTGTTCCTC GGCGTGCTCA CGTGGAAAAC CACGCACGAG
CTCGATCCGT ACAAGCCGCT CGAGTCGTCG GTGAAGCCGA TCGACGTCGA GGTCGTCGCG
CTCGACTGGA AGTGGCTGTT CATCTATCCG GAACTCGGCA TCGCGTCGGT GAACCAGCTC
GCGATTCCGG TCGGCACGCC GGTGAACTTC CGCATCACGT CGGATTCGGT GATGAACTCG
TTCTTCATTC CGCAGCTCGG CGGCCAGGTC TACGCGATGG CCGGCATGCA GACGCGCCTG
CACCTGATCG CCGACGAAGC CGGCGACTAC GCGGGCACGT CCGCCAACTT CAGCGGCCGC
GGCTTCTCCG ACATGAAGTT CCGCACGCTC GCCGAGCCGC GCGAGCAGTT CGACGCATGG
GTGCAGAAGG TGAAGGCCTC GCCCGAGCGG CTCGACGCGA CCGTGTACGG CACCGTCGCG
CAGCCGAGCG AGAAGGCGCC CGTGCGCTAC TTCTCGTCGG TGGATCCGCG GCTCTTCCAC
AACATCATCG CGAAGTACAA CGATGGCCAC GTTCTCGACC TGAAGGACGC CGCCTGCGGC
ACGAAGGGGT AA
 
Protein sequence
MSIGAALSLS GCKLDVLNPK GSVGAAEKAL IATSTWAMLV VVVPVILLTL WFAWRYRASN 
RNATYAPNWS HSTAIEVVIW TVPTLIILFL GVLTWKTTHE LDPYKPLESS VKPIDVEVVA
LDWKWLFIYP ELGIASVNQL AIPVGTPVNF RITSDSVMNS FFIPQLGGQV YAMAGMQTRL
HLIADEAGDY AGTSANFSGR GFSDMKFRTL AEPREQFDAW VQKVKASPER LDATVYGTVA
QPSEKAPVRY FSSVDPRLFH NIIAKYNDGH VLDLKDAACG TKG