Gene BamMC406_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1975 
Symbol 
ID6178653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2201692 
End bp2202300 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content65% 
IMG OID641681740 
Productcytochrome o ubiquinol oxidase, subunit III 
Protein accessionYP_001808672 
Protein GI172061020 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGA AAACCTTGAG CGCAACCCTG CTCGAGCACG ACGACCATCC GCCGTCGCAC 
TCGGTGTTCG GCTTCTGGCT GTACCTGATG ACCGACTGCG TGATCTTCGC GGCGCTGTTC
GCGACGTTCG CGGTGCTCGG CAACCAGTAC GCGGGCGGTC CGACCGCGAA GGACCTGTTC
GACATTCCGG GCGTCGCGGT CGAAACCGCC GCGCTGCTGC TGTCGAGTAT CACCTACGGC
TTCGCGATGC TGGCCGCGTA CAAGCAGCGG CGCGGCGCGC TGCTCGCATG GCTCGCGGTG
ACGTTCGCGC TCGGCGCGGC GTTCCTCGCG ATGGAACTGC GCGAGTTCTC GCACCTGATC
GCGGACGGCG CAGGCCCGCA GCGCAGCGCG TTCCTGTCCG CGTTCTTCAC GCTGGTCGGC
ACGCACGGGC TGCACGTGAC GGCCGGCCTG CTGTGGATGA TCGTGCTCGC GGCGCAGATC
GTATTGCGCG GCGGTGATCT GACCGATCGC GACCTGCGGC GCCTGACGTG CCTGAGCCTT
TTCTGGCACT TCCTCGACAT CGTGTGGATC TGCGTGTTTT CCTTTGTCTA TCTTGCGAGC
GTGATCTAA
 
Protein sequence
MLQKTLSATL LEHDDHPPSH SVFGFWLYLM TDCVIFAALF ATFAVLGNQY AGGPTAKDLF 
DIPGVAVETA ALLLSSITYG FAMLAAYKQR RGALLAWLAV TFALGAAFLA MELREFSHLI
ADGAGPQRSA FLSAFFTLVG THGLHVTAGL LWMIVLAAQI VLRGGDLTDR DLRRLTCLSL
FWHFLDIVWI CVFSFVYLAS VI