Gene BamMC406_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1974 
Symbol 
ID6178655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2201359 
End bp2201691 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content64% 
IMG OID641681739 
Productcytochrome o ubiquinol oxidase subunit IV 
Protein accessionYP_001808671 
Protein GI172061019 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCATT CGCATTCGTC TCAACTCGAA GAAGGGCACG GCAGCGTCGG CGGCTATGTC 
GCCGGGTTCA TCCTGTCGGT GGTGCTCACG GCCGCGTCGT TCGGCCTCGT GATGGGCGGC
GTGCTGTCGC CGCACGCATC GCTGATCGCG CTGGCCGCGC TCGCGTTCGT GCAGATCGTC
GTGCACCTCG TGTACTTCCT GCACATGAAC GGCTCGTCCG GCCAGCGCTG GAACGTGATG
GCGTTCAGCT ACACCGTGCT GACCGCGGCG ATCCTGATCG TCGGCACGCT GTGGGTAATG
CACAACGTCA GCATGAACAT GATGTCGCGC TGA
 
Protein sequence
MAHSHSSQLE EGHGSVGGYV AGFILSVVLT AASFGLVMGG VLSPHASLIA LAALAFVQIV 
VHLVYFLHMN GSSGQRWNVM AFSYTVLTAA ILIVGTLWVM HNVSMNMMSR