| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1967 |
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| Symbol | |
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| ID | 6178603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2194947 |
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| End bp | 2196122 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641681732 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001808664 |
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| Protein GI | 172061012 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0310111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTG AATTCGACGT CCGTCCCCCC GCCACGCCGC GTTACCTGAA ACCGCTCGCG
ATCGCCGGCG TGATCGCGGC ACTCGCCGCC GCCGCGACCG GCGTCGTCGA ACGCGCGCAC
GATGCGCGTG AAGTCGCCGC GTGGACCGCC AGCCAGGCGA TCCCGACCGT CGCGACGGTC
GCGCCGCAGC CGGCCGCCGA CGATGCGCTG GTGCTGCCAG GCCGCCTCGA CGCCTATGTC
GACGCGCCGA TCTACGCGCG CGTGCCCGGC TACCTGCACG CGTGGTACGT CGACATCGGC
GCGCACGTGA AGGGCGGCCA GTTGCTCGCG TCGATCGACA CGCCCGACCT CGACCAGCAG
CTGCAGCAGG CGCGCGCCGA CCTGGAAAGC GCGACTGCGA ACGAACGGCT CGCGGCCGTC
ACCGCCGCGC GCTGGTCCGA GATGCTCGCG CAGGATTCGG TGTCGCGGCA GGAGGCCGAC
GAGAAGCGCA GCGATCTCGA TGCGAAACGC GCGGCCGTGG CCGCCAGCAC CGCGAACGTG
CGGCGGCTCG AGGCGCTCGA ATCGTTCAAG CGCCTCACCG CGCCGTTCGA CGGCGTCGTG
ACCGCGCGCA AGACCGATGT CGGCGCGCTG ATCGACGCGG GCAGCGGCAA CGGTGCCGAG
CTCTTCACCG TCTCGGATGC ACGGCGGCTG CGGCTCTACG TCCATATTCC GCAGGACGAC
GCGGGCGCGA TCCGTGCGGG CATGCATGTC GCGCTGAGCG TGCCCGAGCG TCCTGGCACG
ACGTTCGATG CGACGCTCGC CGATTCCGCG CAGGCGATCG ACCCGGCTTC CGGCACGCTG
CTCGCGCAGT TCTCGATCGC GAACCCGGCA GGCACGCTGT TCCCCGGCGA ATACGCGCAG
GTGCGGATCG CGGTGGCCAA CGCCGCGCAC GCGCTGACGA TTCCGGCGAG CACGCTGATC
TTCCGCCACG ACGGGTTGCA GATCGCCGTG CTCGACGCGA CCGGGCATGC GCGCTTGCGC
CACGTGTCGA TCGCGACCGA TCTCGGCACG CGCGTCGAGA TCGCGTCGGG CCTCGCGGCG
AGCGACCGCG TGATCGACAA CCCGCCCGAT TCGCTCGCGG ATGGGGACCC GGTCCGCATC
GCCGGCACCG CGACGAAGGA GCCTGCGCAT GGCTGA
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| Protein sequence | MSTEFDVRPP ATPRYLKPLA IAGVIAALAA AATGVVERAH DAREVAAWTA SQAIPTVATV
APQPAADDAL VLPGRLDAYV DAPIYARVPG YLHAWYVDIG AHVKGGQLLA SIDTPDLDQQ
LQQARADLES ATANERLAAV TAARWSEMLA QDSVSRQEAD EKRSDLDAKR AAVAASTANV
RRLEALESFK RLTAPFDGVV TARKTDVGAL IDAGSGNGAE LFTVSDARRL RLYVHIPQDD
AGAIRAGMHV ALSVPERPGT TFDATLADSA QAIDPASGTL LAQFSIANPA GTLFPGEYAQ
VRIAVANAAH ALTIPASTLI FRHDGLQIAV LDATGHARLR HVSIATDLGT RVEIASGLAA
SDRVIDNPPD SLADGDPVRI AGTATKEPAH G
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