| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1963 |
|---|
| Symbol | |
|---|
| ID | 6178385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2187841 |
|---|
| End bp | 2188884 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641681728 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001808660 |
|---|
| Protein GI | 172061008 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGAGCT ACATCCTCAA ACGCCTGCTG CTGATGATCC CGACGCTCAT CGGCGTGCTC
ACGCTCACGT TCGCCGTGAT CCAGTTCGTG CCGGGCGGCC CGGTCGAACA GGCCGTGCAG
GAACTGCGCA AGGGCGCGAC GGAGCAGGGC GCGACGCCGT TCGGGATGCG TGCGCATACC
GGCGTCGACG CGCAGCAGCT CGCGCAGCTC AAGGCGCTGT ACGGCTTCGA CAAGCCGCCG
CTCGAGCGCT ACTGGCTGAT GCTCGAGCGC TTTGCGCGCT TCGATCTCGG CGACAGCTAC
TTCCGCCACC AGAGCGTGTG GTCGCTGATC GTGCAGAAGC TGCCGGTGTC GATCAGCATC
GGGTTGTGGA CGTTCTTCGT CACCTACCTG ATCTCCGTGC CGCTCGGCAT CGCGAAGGCC
GTGCGCAACG GCTCGCCGTT CGACGTCGCG ACGAGCCTCG TCGTGCTGGT CGGCTATGCG
ATCCCGGGCT TCGTGCTCGG CGTGCTGCTG CTCGTGCTGT TCGGCGGCGG CTCGTTCTGG
CAGCTGTTCC CGCTGCGCGG GCTCACGTCG GACAACTTCG CGCAACTGTC GCTCGCCGGC
AAGGTGCTCG ACTATCTGTG GCACATCGCG CTGCCGATCA CGGCGTCGGT CGTCGGCAGC
TTCGCGGTCA TCACGATGCT CACGAAGAAC GCGTTCCTCG ACGAGATCCG CAAGCAGTAC
GTGCTGACCG CGCGCGCGAA AGGCCTCGCC GAGCGCACCG TGCTGTGGAA GCACGTGTTC
CGCAACGCGA TGCTGCCGCT GATCGTCGGT TTCCCGGCCG CGTTCATCGG CGCGTTCTTC
ACGGGCAGCC TGCTGATCGA GACGCTGTTC TCGCTCGACG GCCTCGGGCT GCTGTCGTAC
GAGTCGGTCG TGCGGCGCGA CTACCCGGTG GTGCTCGGCA CGCTGTACCT GTTCACGCTG
ATCGGGCTCG CGACCAAGCT GGTCTCCGAC CTCTGCTACG TGTGGGTCGA CCCGCGCATT
CAATTCGACA ACCTGGAGCG CTGA
|
|---|
| Protein sequence | MWSYILKRLL LMIPTLIGVL TLTFAVIQFV PGGPVEQAVQ ELRKGATEQG ATPFGMRAHT
GVDAQQLAQL KALYGFDKPP LERYWLMLER FARFDLGDSY FRHQSVWSLI VQKLPVSISI
GLWTFFVTYL ISVPLGIAKA VRNGSPFDVA TSLVVLVGYA IPGFVLGVLL LVLFGGGSFW
QLFPLRGLTS DNFAQLSLAG KVLDYLWHIA LPITASVVGS FAVITMLTKN AFLDEIRKQY
VLTARAKGLA ERTVLWKHVF RNAMLPLIVG FPAAFIGAFF TGSLLIETLF SLDGLGLLSY
ESVVRRDYPV VLGTLYLFTL IGLATKLVSD LCYVWVDPRI QFDNLER
|
|---|
| |