| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1961 |
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| Symbol | |
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| ID | 6178459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2185076 |
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| End bp | 2186698 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681726 |
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| Product | ABC transporter related |
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| Protein accession | YP_001808658 |
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| Protein GI | 172061006 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.323177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.323319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CGGCCGTATC GAAATCGGGC GAACCGCTGC TGTCGCTCGA GCATCTGCAT
GTGCGCTTCG GCGACACGGT GGCCGTCGAC GACGTGACGC TCGCGATCGG TCGCGGCGAG
CGCGTCGCGC TCGTCGGCGA GTCGGGCTCG GGCAAGAGCG TGACCGCGCT GGCGATCCTG
CGGCTGCTGC GCGATGCCGA CGTGAGCGGC ACGATCCGCC TGGCCGGACA AGACCTCGCC
GGCAAGAGCG AGCGCGAGAT GCGCGGGCTG CGCGGCTCGG ACATCGCGAT GATCTTCCAG
GAGCCGATGA CGGCGCTCAA CCCGCTGTAT ACGATCGGCG CGCAGATCGG CGAGACGATC
GTGCTGCACG ACGGCGTGAC GGCGGCCGAG GCGCGCAAGC GCGCGATCGC GCTGCTCGCG
CGCACGGGCA TCGCGGAGCC GGAGAAGCGC GTCGACAGCT ACCCGCACCA GTTGTCGGGC
GGCCAGCGGC AGCGCGCGAT GATCGCGATG GCGCTCGCGT GCCGGCCGCG CCTGCTGCTC
GCAGACGAGC CGACCACCGC GCTCGACGTG ACGATCCGCG CGCAGATCGT CGACCTGCTG
CTCGAACTGC AGCGCGAGGA GGCGGAAAAG CGCGGGATGG CGATCCTGCT GATCACGCAC
GACCTGAACC TCGTGCGGCA CTTCGCCGAT CGGGTCGCGG TGATGGAGCG CGGCAAGCTG
GTCGAAACCG GGCCGGTCGA GCGGATCTTT GCGCAGCCGG AGCATCCGTA TACGCAGCGG
CTGCTGAACA GCCGCCCGCA GCGCGCGGTC GTGCCGGTGA TGCCCATTGC GCCCGTCGTG
CTCGACGCGC GCCACGTCAG CGTGCAGTTC GCGCGCAAGC GGCCGGGCTT CGCGGGCTGG
TTCGGCACGG TGCCCGTGAC GGCGGTCGCG GACGTGTCCG TGTCGGTGCG GCAGGGCGAG
ACGCTCGGCA TCGTCGGCGA ATCGGGGTCC GGCAAGTCGA CGCTCGCGAT GGCGCTGCTC
GGGCTGCAGA AGACGACGCA CGGCGAAATC GAATTCCAGG GACGCGCGCT GTCGACCTAT
CGCGGCCGGG AGCAGACCGC GCTGCGCTCG AACATGCAGG TCGTCTTTCA GGATCCCTTC
AGTTCACTTT CTCCGCGTCA CACGATCGAA CGGATCGTCG GCGAGGGGCT CGAACTGCAT
CGTCCGGAAC TGACGCCGGA TGCGCGCCGC GCGAAGTCGC TGGCCGTGCT GCGCGAAGTG
GGGCTCGACC GCACGGTGCT GCATCGTTAT CCGCATGAAT TCTCGGGCGG CCAGCGCCAG
CGGATCGCGA TCGCGCGCGC GCTCGTGCTG GAGCCGCGCA TCCTGATCCT CGACGAACCG
ACGTCCGCGC TCGACGTATC GATCCAGCAG CAGGTGCTGA AACTGCTCGC GAATTTGCAA
CAGAAATACA ACCTGGGCTA TGTGTTCATC AGCCACGACC TGGAGGTGAT CGGCGCGATG
GCGCACCGCG TCGCGGTGAT GCAGGAGGGG GTCGTCGTGG AGTCGGGAGA GGTCGCCGAG
ATCTTCGCCA GACCGTCACA TCCTTACACA CAAAAGCTGT TGAAAGCGGT CTGGAAAGCG
TGA
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| Protein sequence | MSDTAVSKSG EPLLSLEHLH VRFGDTVAVD DVTLAIGRGE RVALVGESGS GKSVTALAIL
RLLRDADVSG TIRLAGQDLA GKSEREMRGL RGSDIAMIFQ EPMTALNPLY TIGAQIGETI
VLHDGVTAAE ARKRAIALLA RTGIAEPEKR VDSYPHQLSG GQRQRAMIAM ALACRPRLLL
ADEPTTALDV TIRAQIVDLL LELQREEAEK RGMAILLITH DLNLVRHFAD RVAVMERGKL
VETGPVERIF AQPEHPYTQR LLNSRPQRAV VPVMPIAPVV LDARHVSVQF ARKRPGFAGW
FGTVPVTAVA DVSVSVRQGE TLGIVGESGS GKSTLAMALL GLQKTTHGEI EFQGRALSTY
RGREQTALRS NMQVVFQDPF SSLSPRHTIE RIVGEGLELH RPELTPDARR AKSLAVLREV
GLDRTVLHRY PHEFSGGQRQ RIAIARALVL EPRILILDEP TSALDVSIQQ QVLKLLANLQ
QKYNLGYVFI SHDLEVIGAM AHRVAVMQEG VVVESGEVAE IFARPSHPYT QKLLKAVWKA
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