| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1956 |
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| Symbol | |
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| ID | 6178314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2178697 |
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| End bp | 2179578 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681714 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001808653 |
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| Protein GI | 172061001 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00233066 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.263741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGC CTGCCCAAGC CGACACATCG AACCCCTACG ACGTCATCGA CATCCCGCCC
GAGTTCGCGC CGACCCGCGT CCACCCGATG CGCGTCCGGG CGCGGCAGGT GGATGCCGGC
CGGCGGATCC CGCTGCACAC GCATGCGTGG GCGCAGCTCG CGTACGCGTC GCGCGGGGTG
CTGCGCGTCG CGACGACCGG GACGACGTGG ATGGTGCCGC CGTCCCGCGC GATCTGGGTG
CCGCCGCACG TCACGCACGA AGTCGTGATC GTCGAGGACG CGTATCTGCG CACGCTGTAT
ATCGACGAGT CGATCGTGCC GGACGGGCTC GATGCATGCC GGGTGGTCGA GGTGACGGGC
TTGCTGCGCG AACTGATCGT CGCGCTCGAC GCGCGCGACC TGAGCGATGC GCGCGAGCGG
CTGCTGTGCG GGCTCGTGCT CGACGAGCTG AGCCGCGCCG AACCGCTGCC GCTCGCGGTG
CCGATGCCCG ACGAGAAACG GCTGCGCATG CTGTGCGAGT CGGTGCTCGC GCAACCGGCG
CATGCGGAAT CGCTCGAGCA CTGGGCAAGC GAGGTCGGCG CGAGCACGCG CACGATTTCG
CGGCTCTTCA AGCAGGAGCT GGGCGTGAGT TTTTCGCAGT GGCGGCAGCA GGCGCTGCTC
GCGCGCGCGA TCCCGCTGTT GAACCAGGGG CGTCCGCTGT CGCATATCGC GCGCGAACTC
GGCTACCAGA GCCAGAGTGC GTTTTCGGCG ATGTTCCGGC GCGCGTTCGG CGAAAGCCCG
CGCGCGTTCA TGCTGCGCGG CTACGAGCAC CGCGGCGCGG AAGACGGCAT CGCGACGGAC
GACGCCCTCG ACGACGACGA CGCGTTCGGC ACCGCCCGCT GA
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| Protein sequence | MNPPAQADTS NPYDVIDIPP EFAPTRVHPM RVRARQVDAG RRIPLHTHAW AQLAYASRGV
LRVATTGTTW MVPPSRAIWV PPHVTHEVVI VEDAYLRTLY IDESIVPDGL DACRVVEVTG
LLRELIVALD ARDLSDARER LLCGLVLDEL SRAEPLPLAV PMPDEKRLRM LCESVLAQPA
HAESLEHWAS EVGASTRTIS RLFKQELGVS FSQWRQQALL ARAIPLLNQG RPLSHIAREL
GYQSQSAFSA MFRRAFGESP RAFMLRGYEH RGAEDGIATD DALDDDDAFG TAR
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