| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1954 |
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| Symbol | |
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| ID | 6178345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2176299 |
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| End bp | 2177891 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681713 |
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| Product | malate synthase |
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| Protein accession | YP_001808652 |
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| Protein GI | 172061000 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00549462 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.794908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC CGATCACGCT GCCGCAAGGC ATGGCGATCA CCGGCGAAAT CAAGCCGGGA
TACGAAGCAA TCCTGACGCC TGAAGCACTC GCGCTCGTCG CGGCGCTGCA CCGTACGTTC
GAGCCGCGTC GCCAGACGCT GCTGCAGGAC CGCGTCGAAC GCACCAAGCG CCTCGACGCC
GGCGAACGCC CCGATTTCCT GGCCGACACG AAGGCGATCC GCGAAGGCGA CTGGAAGGTG
GCGCCGCTGC CGGCCGACCT GCAATGCCGC CGTGTCGAGA TCACGGGCCC CGTCGAGCGC
AAGATGATCA TCAACGCGCT GAACTCCGGC GCCGACTCGT ACATGACGGA CTTCGAGGAT
TCGAACGCGC CGAGCTGGAC GAACCAGATC GACGGCCAGA TCAACCTGAA GGACGCGGTG
CGCCGCACGA TCTCGCTCGA GCAGAACGGC AAGTCGTACC GGCTGAACGA CAAGGTCGCG
ACGCTGATCG TGCGTCCGCG CGGCTGGCAT CTCGACGAGA AGCACGTGAC GGTCGACGGC
CAGCGCGTGT CCGGCGGCAT CTTCGATTTC GCGCTGTTCC TGTTCCACAA CGCGAAGGAA
CTGATCGCGC GCGGCTCGGG CCCCTACTTC TACCTGCCGA AGATGGAAAG CCATCTGGAG
GCGCGCCTGT GGAACGACAT CTTCGTCGCG GCACAGGAAG CGGTCGGCGT GCCGCGCGGC
ACGATCCGCG CGACGGTGCT GATCGAGACG ATCCTCGCCG CGTTCGAGAT GGACGAGATC
CTGTACGAGC TGCGCGAACA CAGCTCGGGC CTGAACGCCG GCCGCTGGGA CTACATCTTC
TCGGCGATCA AGAAGTTCAA GAACGATCGC GACTTCTGCC TGGCCGACCG CGCGAAGATC
ACGATGACGG TGCCGTTCAT GCGCGCGTAC GCACTGCTGC TGCTGAAGAC CTGCCACAAG
CGCAATGCAC CGGCCATCGG CGGGATGAGC GCGCTGATTC CGATCAAGAA CGATCCACAA
GCAAACGAGA AGGCGATGGG CGGCGTGCGC TCGGACAAGC AGCGCGACGC GACCGACGGC
TACGACGGCG GCTGGGTCGC GCACCCGGGC CTCGTGCCGA TCGCGATGGA GGAATTCGTC
AAGGTGCTCG GCGACAAGCC GAACCAGATC GCCAAGCAGC GCGACGACGT GCAGATCGAA
GGCAGGAATC TGCTCGACTT CCAGCCTGAG GCGCCGATCA CCGAGGCCGG CCTGCGCAAC
AACATCAACG TCGGCATCCA TTATCTCGGC GCGTGGCTCG ACGGCAACGG CTGCGTGCCG
ATCCACAACC TGATGGAAGA CGCGGCCACC GCCGAAATCT CCCGCTCGCA GGTATGGCAA
TGGATCCGCT CGCCGAAGGG CGTGCTCGAC GACGGCCGCA AGGTCACGGC GGAACTCGTG
CGCGAATTCA CGAAGGCCGA GCTCGACAAC GTGAAGCGCT CCGTCGGCGG CAATACGCAG
CCCTACGAGC GTGCTGCGGC GATCTTCGAA CAGATGTCGA CGTCGGAAGG CTTCACCGAA
TTCCTGACGC TGCCGCTGTA CGAGGAAATC TGA
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| Protein sequence | MSTPITLPQG MAITGEIKPG YEAILTPEAL ALVAALHRTF EPRRQTLLQD RVERTKRLDA
GERPDFLADT KAIREGDWKV APLPADLQCR RVEITGPVER KMIINALNSG ADSYMTDFED
SNAPSWTNQI DGQINLKDAV RRTISLEQNG KSYRLNDKVA TLIVRPRGWH LDEKHVTVDG
QRVSGGIFDF ALFLFHNAKE LIARGSGPYF YLPKMESHLE ARLWNDIFVA AQEAVGVPRG
TIRATVLIET ILAAFEMDEI LYELREHSSG LNAGRWDYIF SAIKKFKNDR DFCLADRAKI
TMTVPFMRAY ALLLLKTCHK RNAPAIGGMS ALIPIKNDPQ ANEKAMGGVR SDKQRDATDG
YDGGWVAHPG LVPIAMEEFV KVLGDKPNQI AKQRDDVQIE GRNLLDFQPE APITEAGLRN
NINVGIHYLG AWLDGNGCVP IHNLMEDAAT AEISRSQVWQ WIRSPKGVLD DGRKVTAELV
REFTKAELDN VKRSVGGNTQ PYERAAAIFE QMSTSEGFTE FLTLPLYEEI
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