| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1953 |
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| Symbol | |
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| ID | 6178383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2175470 |
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| End bp | 2176231 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681712 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001808651 |
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| Protein GI | 172060999 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.438446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.480955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCA CAACGACACT CTCCTCTCCC GACGCAATCC TCTTCGACGC ATTCGGCACG
TTGTTCGACG TGCATGCGGT CGTGGCCGCG GCGGAGCAGA TGTTTCCCGG TCACGGGGAG
CGGTTGTCGC AGCTGTGGCG ACGCAAGCAA ATCGAATACT CGCAGTTGCG CACGCTCGCC
GATCCGGCCG GCGCCCGCTA TCGCCCGTTT CGCGACATCA CGCTCGACGC GCTGCGCTTC
GCCGCGCGCG TGCTCGGCCT CACGCTGAAC AGCGCGGCCG AGAAACGGCT GATGGACGAA
TACGCGTGCC TGTCCACCTA CCCCGACACG CTGCCCGCGC TGCGCAAGCT GCGCGCGCTC
GACCCGCGCC CGCCGCTCGC GATCCTGTCG AACGGCAACC CGGAGATGCT CGACATCGCG
ATCAAGAGCG CCGGCATGAC CGGCCTGTTC GATCGCGTGC TGTCGGCCGA CACGGTGCGC
GCGTACAAGC CGAGTCCGGC CGTCTACGCA CTCGGCACCG CGGCGTTCGG CGCGAACGCG
CGCGACATCG TGTTCGTGTC GTCGAACGCG TGGGACGTCG CGGGGGCCGC CTGGTTCGGC
TACACGACGT TCTGGCTCAA CCGCACGGGC GCGCCCGCCG AGGAACTCGG CGCGCCGCCC
GATGGCACCG GCAGCGGCAT GGCCGATCTG CTCGCCTTCC TCGCCACCCC GGCTCCGTCC
GGCAGACCCG CAAACCGCGC GCGCCCCGGC CCGGGCGCAT GA
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| Protein sequence | MSATTTLSSP DAILFDAFGT LFDVHAVVAA AEQMFPGHGE RLSQLWRRKQ IEYSQLRTLA
DPAGARYRPF RDITLDALRF AARVLGLTLN SAAEKRLMDE YACLSTYPDT LPALRKLRAL
DPRPPLAILS NGNPEMLDIA IKSAGMTGLF DRVLSADTVR AYKPSPAVYA LGTAAFGANA
RDIVFVSSNA WDVAGAAWFG YTTFWLNRTG APAEELGAPP DGTGSGMADL LAFLATPAPS
GRPANRARPG PGA
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