Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1946 |
Symbol | |
ID | 6178328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2168813 |
End bp | 2169580 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641681705 |
Product | peptidase M22 glycoprotease |
Protein accession | YP_001808644 |
Protein GI | 172060992 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCCA TGACGCAAAC AGTGCTCCTC GCCATCGATA CGTCGACCGA ATACTGCTCG GTCGCGCTGC TGCGCTCGGC TTCGGCCGAT GACGCCGTTT CCACCCCGCA AACCTGGGTC CGCCACGAAC CGACGGGCGC CGTGTCGAGC ACGCGCGTGC TGCCGGCCAT CCAGGAACTC TTCGCCGAAT CGGGCCTGTC GTTCGCCGAC TGCGACGCGA TCGCGTTCGG CGCGGGCCCC GGCTCGTTCA CCGGCCTGCG TACCGCGACC GGCATTACCC AGGGGCTCGC GTTCGGGCGC GGGCTGCCGG TCGTGCCGGT CAGCACGCTG CTCGCATGCG CCGAGCACGC GCGGCTGCGC GCGCCCGGCA CGACGCGCGT GCTGGTCGCG CTCGACGCGC GGATGGACGA AGCGTACTGG GCCGATTTCG CGTGGGACGA TCAGGCGGGC GACTGGCGCA CGCTGCATCC GGCGTCGCTC GATGCGCCGG GCGCCGTCGG CGTGCCCGAC GTGCCGTTCA CGCTCGCGGG CAACGCGGCG GCCGCGTTCG GCGCGCAGTT GCCGGCTGCC GCCGCGGCAG CCGTGATCGA CGGCGACGCG CTGCCGCATG CGCTGGCGGT CGCGCATGCC GCGCTGCGCG CGTTTCGCGC CGGCCGCACG GTGCCGGCCG ATCAGGCCGC GCCGGAATAC GTGCGCGACA AGGTCGCGCA GACCACCGCC GAGCGCCTCG CGGCGCGCGC CGCGCAGACG GGCGGAGCGA AAGGATGA
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Protein sequence | MSAMTQTVLL AIDTSTEYCS VALLRSASAD DAVSTPQTWV RHEPTGAVSS TRVLPAIQEL FAESGLSFAD CDAIAFGAGP GSFTGLRTAT GITQGLAFGR GLPVVPVSTL LACAEHARLR APGTTRVLVA LDARMDEAYW ADFAWDDQAG DWRTLHPASL DAPGAVGVPD VPFTLAGNAA AAFGAQLPAA AAAAVIDGDA LPHALAVAHA ALRAFRAGRT VPADQAAPEY VRDKVAQTTA ERLAARAAQT GGAKG
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