Gene BamMC406_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1946 
Symbol 
ID6178328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2168813 
End bp2169580 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content74% 
IMG OID641681705 
Productpeptidase M22 glycoprotease 
Protein accessionYP_001808644 
Protein GI172060992 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCCA TGACGCAAAC AGTGCTCCTC GCCATCGATA CGTCGACCGA ATACTGCTCG 
GTCGCGCTGC TGCGCTCGGC TTCGGCCGAT GACGCCGTTT CCACCCCGCA AACCTGGGTC
CGCCACGAAC CGACGGGCGC CGTGTCGAGC ACGCGCGTGC TGCCGGCCAT CCAGGAACTC
TTCGCCGAAT CGGGCCTGTC GTTCGCCGAC TGCGACGCGA TCGCGTTCGG CGCGGGCCCC
GGCTCGTTCA CCGGCCTGCG TACCGCGACC GGCATTACCC AGGGGCTCGC GTTCGGGCGC
GGGCTGCCGG TCGTGCCGGT CAGCACGCTG CTCGCATGCG CCGAGCACGC GCGGCTGCGC
GCGCCCGGCA CGACGCGCGT GCTGGTCGCG CTCGACGCGC GGATGGACGA AGCGTACTGG
GCCGATTTCG CGTGGGACGA TCAGGCGGGC GACTGGCGCA CGCTGCATCC GGCGTCGCTC
GATGCGCCGG GCGCCGTCGG CGTGCCCGAC GTGCCGTTCA CGCTCGCGGG CAACGCGGCG
GCCGCGTTCG GCGCGCAGTT GCCGGCTGCC GCCGCGGCAG CCGTGATCGA CGGCGACGCG
CTGCCGCATG CGCTGGCGGT CGCGCATGCC GCGCTGCGCG CGTTTCGCGC CGGCCGCACG
GTGCCGGCCG ATCAGGCCGC GCCGGAATAC GTGCGCGACA AGGTCGCGCA GACCACCGCC
GAGCGCCTCG CGGCGCGCGC CGCGCAGACG GGCGGAGCGA AAGGATGA
 
Protein sequence
MSAMTQTVLL AIDTSTEYCS VALLRSASAD DAVSTPQTWV RHEPTGAVSS TRVLPAIQEL 
FAESGLSFAD CDAIAFGAGP GSFTGLRTAT GITQGLAFGR GLPVVPVSTL LACAEHARLR
APGTTRVLVA LDARMDEAYW ADFAWDDQAG DWRTLHPASL DAPGAVGVPD VPFTLAGNAA
AAFGAQLPAA AAAAVIDGDA LPHALAVAHA ALRAFRAGRT VPADQAAPEY VRDKVAQTTA
ERLAARAAQT GGAKG