| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1928 |
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| Symbol | |
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| ID | 6177394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2147205 |
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| End bp | 2150717 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681687 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001808626 |
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| Protein GI | 172060974 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.5125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.122807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCTGA GCTCGATCAA ACTCGCTGGC TTCAAATCCT TTGTCGATCC CACGCATTTC
CAGGTTCCGG GCCAGCTAGT CGGCGTGGTG GGCCCGAACG GGTGCGGCAA GTCCAACATC
ATCGATGCCG TGCGCTGGGT GCTCGGCGAG TCGCGCGCGT CCGAGCTGCG CGGCGAGTCG
ATGCAGGACG TGATCTTCAA CGGCTCGACC GCCCGCAAGC CCGGCAGCCG GGCAAGCGTG
GAACTGATCT TCGACAACTC CGACGGCCGC GCGGCCGGGC AGTGGGGCCA GTACGGCGAG
ATCGCCGTGA AGCGCGTGCT GACGCGCGAC GGCACGTCGA GCTACTACAT CAACAATCTG
CCGGCGCGCC GCCGCGACAT CCAGGACATC TTCCTCGGCA CGGGCCTCGG CCCGCGTGCG
TACGCGATCA TCGGCCAGGG CATGATCGCG CGGATCATCG AGGCGAAGCC GGAAGAGCTG
CGCGTGTTCC TCGAGGAAGC CGCGGGCGTG TCCAAGTACA AGGAACGCCG CCGCGAGACC
GAGAACCGCC TGCACGACAC GCGCGAGAAC CTGACGCGGG TCGAGGACAT CGTCCGCGAG
CTCGGCGCGA ACCTCGAGAA GCTCGAGGCG CAGGCCGTCG TCGCCACCAA GTACAAGGAA
CTCGTCGCCG ACGGCGAGGA GAAGCAGCGC CTGTTGTGGC TGCTGCGCAA GAACGAGGCC
GCGAGCGAGC AGCAGAAGCA GCAGCGCGCG ATCGAGCAGG CGCAGATCGA CCTCGAGGCG
CAGACGGCCC GGCTGCGCGA AGTCGAGTCG CAGCTCGAGA CGCTGCGGGT CGCGCATTAC
TCGGCGAGCG ACGCGATGCA GGGCGCGCAG GGCGCGCTCT ACGAGGCGAA CGCCGAAGTG
AGCCGCCTCG AGGCCGAGAT CAAGTTCATC GTCGAATCGC GCAACCGCGT GCAGGCGCAG
ATCGCCGCGT TGAACGCGCA GCGCGAGCAA TGGCGCGCGC AGGCCGAGAA GGCGCAGGAC
GAGCTCGAGG AAGCCGAGGA AGCGCGCGCG ATGGCCGACG AGAAGGCCGC GCTCGCCGAA
GACAACGCGG CCGCGAAGCA CGACGCGCTG CCGGCGCTCG AAGCGAAGTG GCGCGATGCG
CAGGCGCAGC TCAACGACGA GCGCGCGCGC ATTGCGCAGA CCGAGCAGTC GCTGAAGCTC
GAGGCCGCGC ACCAGCGCAA TGCCGACCAG CAGCTCCAGC AGCTTCAGCA GCGCCATGAG
CGCCTGAAGT CCGAGGCAGG CGGGCTCGAT GCACCGGACG AAACACAGCT CGAAGAGTTG
CGCATGCAGC TCGCCGAGCA GGAAGAAATC CTCGCCGAGG CGCAGGCGCG CCTGGCCGAT
GCGCAGGAAG CGTTGCCGCG CCTCGACGGC GAACGCCGTG CCGCGCAGGA GCGCGTGCAG
GCCGAAAGCA CGCAGATCCA CCAGCTCGAG GCGCGGCTCG CCGCGCTCAA GCAGCTGCAG
GAGAACGTGC AGACCGAAGG CAAGATCCAG CCGTGGCTCG ACAAGCACGA ACTCGGCGCG
CTGCCGCGCT TGTGGAAGAA GCTGCACGTC GAAGCGGGCT GGGAAGCGGC GCTCGAGGCC
GTGCTGCGCG AGCGCCTCGC CGCGCTCGAA GTGTCGAACC TCGACTGGGT GAAGGCGTTC
GCGACCGATG CGCCGCCCGC GAAGCTCGCG TTCTACGCGC CGCCGGCCGC CGGTGAACCG
CCGGCCGCCG CGGCCGGGCT GCGCCCGGTG CTGTCGCTCG TACGCATCGA CGATGCAGGC
ATTCGCGCGG TGCTGAACGA CTGGCTCGGC AACGTGTACG TCGCCGACGA CATCACACAG
GCGCTCGCGA CGCGTGCGCA ACTGCCGGCA AGCGGCGCGT TCGTCGTCAA GGCCGGCCAC
ATCGTCACGC GCGTCGGCGT GCAGCTGTAC GCGGCCGACT CGGAGCAGGC CGGGATGCTG
GCCCGCCAGC AGGAAATCGA GAACCTGGGC CGCCAGGTGC GTGCGCAGGC GCTGCTCGCC
GACGAGGCCC GCACGGCCGC GGTGCGGGCG GAAGCCGCGC ACACGCAGGC CGCGCAGGCG
CTCGGCGACG TGCGCGCGCA GGCCGAACGC GCGACGCAGC GCGTGCACGC GCTGCAGATG
GACGTGCTGA AGCTCGCGCA GGCGCATGAA CGCTACACGC AGCGCAGCAC GCAGATCCGC
GAGGAACTCG AGGAAATCGG CGCGCAGATC GACGAGCAGC GCGCATTGCG TGCCGAATCG
GAAGCGAACT TCGAGCGTTT CGACGGCGAA CTCGCGGAAC TGCAGGCGCG CTTCGAGGAC
AACCAGCTCG CGTTCGAAGC GCTCGACGAA TCGCTGACGC ACGCGCGCCA GGAAGCGCGC
GACCTCGAGC GCGGCGCGAA CGACGCGCGC TTCGCCGCGC GCAACGCGGT CACGCGGATC
GACGAGCTCA AGCGCAGCAT CCAGGTCGCG CACGAGCAGA GCGAGCGCGT CGCCGCGTCG
CTGGAAGACG CGCGCGCCGA ACTCGAAACG ATCAACGAGC AGACCGCGCA CACGGGGCTA
CAGGACGCGC TCGAAATTCG TGCAGTCAAG GAAGAAGCGC TGCAGGCCGC GCGGATCGAA
CTCGACGACC TGACCGCGAA GCTGCGCGCG TCGGACGAGC AGCGTCTCGT CGCCGAGCGT
TCGCTGCAGC CGCTGCGCGA CCGCATCACC GAGCTCCAGC TGAAGGAGCA GGCCGCGCGC
CTGTCCGTCG AGCAGTTTGC CGAGCAGCTC ACCACCGCCG AGGTCGACGA GGAAGCGCTG
CGCGAGAAGC TGACGCCGGA CCTGAAACCG TCGTACCTGC AGGGCGAGGT CACGCGCCTG
AACAACGCGA TCAACGCGCT GGGCCCGGTG AACATGGCCG CGCTCGACGA GCTGAAGGCC
GCGAGCGAGC GCAAGGTGTT CCTCGATGCG CAGTCGGCCG ACCTGACCGA TGCGATCACG
ACGCTCGAGG ACGCGATCCA CAAGATCGAC CAGGAAACCC GCACGCTGCT GCAGGGCACC
TTCGACGAGG TCAACCGTCA CTTCAGCGAC CTGTTCCCGC GCCTGTTCGG CGGCGGCCAG
GCGAAGCTGA TCATGACGGG CGACGAAATC CTCGATGCGG GCGTGCAGGT GATGGCGCAG
CCGCCGGGCA AGAAGAACGC GACCATCCAC CTGCTGTCGG GTGGCGAGAA GGCGCTGACC
GCCACCGCAC TGGTGTTCGC GATGTTCCAG CTGAACCCGG CGCCGTTCTG TCTGCTCGAC
GAGGTCGACG CGCCGCTCGA CGACGCGAAC ACCGAGCGTT TCGCGAATCT CGTGCGCGCG
ATGTCCGACA AGACGCAGTT CCTCTTCATC TCGCACAACA AGATCGCGAT GGAGATGGCG
CAGCAACTGA TCGGCGTGAC GATGCAGGAG CAGGGCGTGT CGCGGATCGT CGCGGTGGAC
ATGGAAACCG CCGCGGGTTT TGCCCAGAAT TGA
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| Protein sequence | MRLSSIKLAG FKSFVDPTHF QVPGQLVGVV GPNGCGKSNI IDAVRWVLGE SRASELRGES
MQDVIFNGST ARKPGSRASV ELIFDNSDGR AAGQWGQYGE IAVKRVLTRD GTSSYYINNL
PARRRDIQDI FLGTGLGPRA YAIIGQGMIA RIIEAKPEEL RVFLEEAAGV SKYKERRRET
ENRLHDTREN LTRVEDIVRE LGANLEKLEA QAVVATKYKE LVADGEEKQR LLWLLRKNEA
ASEQQKQQRA IEQAQIDLEA QTARLREVES QLETLRVAHY SASDAMQGAQ GALYEANAEV
SRLEAEIKFI VESRNRVQAQ IAALNAQREQ WRAQAEKAQD ELEEAEEARA MADEKAALAE
DNAAAKHDAL PALEAKWRDA QAQLNDERAR IAQTEQSLKL EAAHQRNADQ QLQQLQQRHE
RLKSEAGGLD APDETQLEEL RMQLAEQEEI LAEAQARLAD AQEALPRLDG ERRAAQERVQ
AESTQIHQLE ARLAALKQLQ ENVQTEGKIQ PWLDKHELGA LPRLWKKLHV EAGWEAALEA
VLRERLAALE VSNLDWVKAF ATDAPPAKLA FYAPPAAGEP PAAAAGLRPV LSLVRIDDAG
IRAVLNDWLG NVYVADDITQ ALATRAQLPA SGAFVVKAGH IVTRVGVQLY AADSEQAGML
ARQQEIENLG RQVRAQALLA DEARTAAVRA EAAHTQAAQA LGDVRAQAER ATQRVHALQM
DVLKLAQAHE RYTQRSTQIR EELEEIGAQI DEQRALRAES EANFERFDGE LAELQARFED
NQLAFEALDE SLTHARQEAR DLERGANDAR FAARNAVTRI DELKRSIQVA HEQSERVAAS
LEDARAELET INEQTAHTGL QDALEIRAVK EEALQAARIE LDDLTAKLRA SDEQRLVAER
SLQPLRDRIT ELQLKEQAAR LSVEQFAEQL TTAEVDEEAL REKLTPDLKP SYLQGEVTRL
NNAINALGPV NMAALDELKA ASERKVFLDA QSADLTDAIT TLEDAIHKID QETRTLLQGT
FDEVNRHFSD LFPRLFGGGQ AKLIMTGDEI LDAGVQVMAQ PPGKKNATIH LLSGGEKALT
ATALVFAMFQ LNPAPFCLLD EVDAPLDDAN TERFANLVRA MSDKTQFLFI SHNKIAMEMA
QQLIGVTMQE QGVSRIVAVD METAAGFAQN
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