| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1911 |
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| Symbol | lpxD |
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| ID | 6176992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2125529 |
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| End bp | 2126638 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681670 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001808609 |
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| Protein GI | 172060957 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.642798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATTGA CGCTCGAGGA ACTCGTAAAG CGGTTCGGCG GCGAGATCGC CGGCGACGCC
CAGTGCAAGG TGAGCGGCCT CGCGCCGCTC GACCAGGCAG GCCCTCAGCA ACTCGCGTTT
CTCGCGAATC CGAAGTACCT GTCGCAGGTC GAGACGACCC GCGCCGGCGC GGTGCTGATC
GCGCCGAAGG ATCTCGAAAA GCTGCGCGCG GCTACTGACG GCCAGCCGGC CGGCCCCCGG
ATGGCCGGCC CCCTCAATTT CATCGTGACG CCGAATCCGT ACGCGTATTT CGCGCGCGTC
GCGCAGATGT TCATCGATCT CGCCACGCCA CCGCGCGCGC CGGGCGTGCA TCCGAGCGCG
ACGATCGATC CGGCCGCCCA GGTTGCCGCG AGCGCGGTGA TCGGCCCGCA CGTGACGGTC
GAGGCCGGCG CGGTGATCGA GGACGGCGTG CAGCTCGACG CGAACGTGTT CATCGGCCGC
GGCACGACGA TCGGCGCGGG TTCGCACCTG TATCCGAACG CATCGGTGTA CCACGGCTGC
AAGATCGGCC CGCGCGCGAT CATCCATGCG GGTGCCGTGA TCGGATCCGA CGGGTTCGGC
TTCGCGCCGG ATTTCGTCGG CGACGGCGAT GCGCGCACCG GCAGCTGGGT CAAGATCCCG
CAGGTCGGCG GCGTGACGGT CGGCCCGGAT GTCGAGATCG GCGCGAACAC GACGATCGAC
CGCGGCGCGA TGGCGGACAC CGTCATCGAC GAATGCGTGA AGATCGACAA TCAGGTTCAG
ATCGGCCACA ACTGCCGGAT CGGTGCCTAC ACGGTGATCG CGGGCAGCGC CGGCATCGCC
GGCAGCACGA CGATCGGCCG CCACTGCATG ATCGGCGGCG CAGCAGGCAT CGCCGGCCAC
GTGACGCTCG GCGACTATGT CATCATCACC GCGAAGTCGG GCGTGTCGAA GTCGCTGCCG
AAGGCCGGCA TCTACACGAG CGCATTCCCG GCCGTCGACC ACGGCGAATG GAACCGGAGC
GCCGCGCTCG TGCGCAACCT CGACAAGCTG CGCGAGCGTA TCAAGGCGCT CGAAACCGCA
CTGGCCGCCC AGGGCGGCAC GGACGCCTGA
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| Protein sequence | MALTLEELVK RFGGEIAGDA QCKVSGLAPL DQAGPQQLAF LANPKYLSQV ETTRAGAVLI
APKDLEKLRA ATDGQPAGPR MAGPLNFIVT PNPYAYFARV AQMFIDLATP PRAPGVHPSA
TIDPAAQVAA SAVIGPHVTV EAGAVIEDGV QLDANVFIGR GTTIGAGSHL YPNASVYHGC
KIGPRAIIHA GAVIGSDGFG FAPDFVGDGD ARTGSWVKIP QVGGVTVGPD VEIGANTTID
RGAMADTVID ECVKIDNQVQ IGHNCRIGAY TVIAGSAGIA GSTTIGRHCM IGGAAGIAGH
VTLGDYVIIT AKSGVSKSLP KAGIYTSAFP AVDHGEWNRS AALVRNLDKL RERIKALETA
LAAQGGTDA
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