| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1908 |
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| Symbol | lpxB |
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| ID | 6176966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2122902 |
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| End bp | 2124071 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681667 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001808606 |
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| Protein GI | 172060954 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.480286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCC CGACCAATCA GCTCCGGCTC GCAATGGTGG CCGGCGAGCC GTCGGGCGAT
CTGCTCGCGG CGTCGCTGCT CGGCGGGCTT CAAGAGCGGC TGCCCGCGTC GACCCGCTAC
TACGGGATCG GCGGGCAGCG GATGCTCGCG CACGGCTTCG ACTCGCACTG GCAGATGGAC
AAGCTCACGG TGCGCGGCTA CGTCGAGGCG CTGGGCCAGA TTCCCGAGAT CCTGCGGATT
CGCGGCGAGT TGAAGCGCCA GCTGCTCGCG GAGCGGCCCG ACGCGTTCAT CGGCGTCGAC
GCGCCCGACT TCAATTTCAG CGTGGAGCAG GCCGCGCGCG ATGCGGGCAT CCCGTCGATC
CACTTCGTGT GCCCGTCGAT CTGGGCGTGG CGCGGCGGGC GGATCAAGAA GATCGCGAAG
TCCGTCGACC ACATGCTGTG CCTGTTCCCG TTCGAACCGG CGATCCTCGA CAAGGCGGGC
GTCGCCTCGA CGTATGTCGG TCATCCGCTC GCCGACGAGA TTCCGCTCGA GCCCGACACG
CACGGCGCGC GCATTGCGCT CGGCTTGCCC GCAGACGGCC CGGTGATCGC GGTGCTGCCG
GGCAGCCGGC GCTCGGAGAT CGGGCTGATC GGCCCGACGT TCTTCGCGGC GATGGCGCTG
ATGCAGCAGC GCGAGCCCGG CGTGCGGTTC GTGATGCCGG CGGCGACGCC TGCGCTGCGC
GAACTGCTGC AGCCGCTCGT GGATGCCCAT CCGCAACTCG CGCTGACGAT CACCGACGGC
CGCTCGCAGG TCGCGATGAC GGCCGCCGAC GCGATCCTCG TGAAGAGCGG CACCGTCACG
CTGGAAGCCG CGCTGCTGAA GAAGCCGATG GTGATCTCGT ACAAGGTGCC CTGGCTGACC
GGGCAGATCA TGCGCCGGCA GGGTTATCTG CCGTACGTCG GCTTGCCGAA CATCTTGGCG
GGGCGCTTCG TCGTGCCCGA GTTGCTGCAG CATTTCGCGA CGCCCGAGGC GCTCGCCGAT
GCGACGCTCA CGCAGCTGCG CGACGACGCG AACCGCCGCA CGCTGACCGA AGTCTTTACC
GAAATGCATC TGTCGCTGCG TCAGAACACG GCCGCGAAGG CCGCCGAAGC GGTCGTGCGC
GTGCTAGACC AACGCCGGGG GCGCGCATGA
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| Protein sequence | MSLPTNQLRL AMVAGEPSGD LLAASLLGGL QERLPASTRY YGIGGQRMLA HGFDSHWQMD
KLTVRGYVEA LGQIPEILRI RGELKRQLLA ERPDAFIGVD APDFNFSVEQ AARDAGIPSI
HFVCPSIWAW RGGRIKKIAK SVDHMLCLFP FEPAILDKAG VASTYVGHPL ADEIPLEPDT
HGARIALGLP ADGPVIAVLP GSRRSEIGLI GPTFFAAMAL MQQREPGVRF VMPAATPALR
ELLQPLVDAH PQLALTITDG RSQVAMTAAD AILVKSGTVT LEAALLKKPM VISYKVPWLT
GQIMRRQGYL PYVGLPNILA GRFVVPELLQ HFATPEALAD ATLTQLRDDA NRRTLTEVFT
EMHLSLRQNT AAKAAEAVVR VLDQRRGRA
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