Gene BamMC406_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1907 
SymbolrnhB 
ID6178833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2122252 
End bp2122905 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID641681666 
Productribonuclease HII 
Protein accessionYP_001808605 
Protein GI172060953 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.420407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCA TCCGTGTGCC ACGCCGCCGC GCGTCGGCCG ATCTGCAAGG CGGTTTCGAC 
TTCAGTCGGC CCGACGAGAT CGTCTGCGGC GTCGACGAAG CGGGCCGCGG CCCGCTCGCG
GGGCCGGTCG TGGCCGCCGC GGTGATCCTC GATCCCGCGC GGCCGATCGA CGGGCTCGAC
GATTCGAAGG CGCTGTCCGC GAAGAAGCGC GACGCGCTGT ACGACCTGAT CGTCGCGCGC
GCGAGCGCGT TTTGCGTCGC GTCGGCCAGC GTCGACGAAA TCGACACGCT GAACATCCTG
CACGCGACGA TGCTGGCGAT GAAGCGGGCC GTCGAGGGCC TGTCGGTGCT GCCGACGCTT
GCCCAGATCG ATGGCAACCG CTGTCCGACG CTGACGGTGC GCGCCGAGGC GATCGTCAGC
GGCGACGCGC TCGTGCCGAG CATCTCGGCC GCGTCGATTC TCGCGAAGGT CACGCGCGAT
CGCATGCTCG TCGATCTGCA TGAACGCTTC CCGGTGTATG GCTTCAACGT GCACGTGGGT
TACAGCACCC CGCAACATCT TGCCGCGCTG CGCGAGCACG GCCCGTGCGA AGTGCATCGG
CGCTCGTTCG CGCCCGTGCG CGAGGCGCTC GACCTGATGG CCGGTTCCCG CTGA
 
Protein sequence
MTAIRVPRRR ASADLQGGFD FSRPDEIVCG VDEAGRGPLA GPVVAAAVIL DPARPIDGLD 
DSKALSAKKR DALYDLIVAR ASAFCVASAS VDEIDTLNIL HATMLAMKRA VEGLSVLPTL
AQIDGNRCPT LTVRAEAIVS GDALVPSISA ASILAKVTRD RMLVDLHERF PVYGFNVHVG
YSTPQHLAAL REHGPCEVHR RSFAPVREAL DLMAGSR