Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1907 |
Symbol | rnhB |
ID | 6178833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2122252 |
End bp | 2122905 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681666 |
Product | ribonuclease HII |
Protein accession | YP_001808605 |
Protein GI | 172060953 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.420407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCA TCCGTGTGCC ACGCCGCCGC GCGTCGGCCG ATCTGCAAGG CGGTTTCGAC TTCAGTCGGC CCGACGAGAT CGTCTGCGGC GTCGACGAAG CGGGCCGCGG CCCGCTCGCG GGGCCGGTCG TGGCCGCCGC GGTGATCCTC GATCCCGCGC GGCCGATCGA CGGGCTCGAC GATTCGAAGG CGCTGTCCGC GAAGAAGCGC GACGCGCTGT ACGACCTGAT CGTCGCGCGC GCGAGCGCGT TTTGCGTCGC GTCGGCCAGC GTCGACGAAA TCGACACGCT GAACATCCTG CACGCGACGA TGCTGGCGAT GAAGCGGGCC GTCGAGGGCC TGTCGGTGCT GCCGACGCTT GCCCAGATCG ATGGCAACCG CTGTCCGACG CTGACGGTGC GCGCCGAGGC GATCGTCAGC GGCGACGCGC TCGTGCCGAG CATCTCGGCC GCGTCGATTC TCGCGAAGGT CACGCGCGAT CGCATGCTCG TCGATCTGCA TGAACGCTTC CCGGTGTATG GCTTCAACGT GCACGTGGGT TACAGCACCC CGCAACATCT TGCCGCGCTG CGCGAGCACG GCCCGTGCGA AGTGCATCGG CGCTCGTTCG CGCCCGTGCG CGAGGCGCTC GACCTGATGG CCGGTTCCCG CTGA
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Protein sequence | MTAIRVPRRR ASADLQGGFD FSRPDEIVCG VDEAGRGPLA GPVVAAAVIL DPARPIDGLD DSKALSAKKR DALYDLIVAR ASAFCVASAS VDEIDTLNIL HATMLAMKRA VEGLSVLPTL AQIDGNRCPT LTVRAEAIVS GDALVPSISA ASILAKVTRD RMLVDLHERF PVYGFNVHVG YSTPQHLAAL REHGPCEVHR RSFAPVREAL DLMAGSR
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