Gene BamMC406_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1900 
Symbol 
ID6176886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2114689 
End bp2115078 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content62% 
IMG OID641681659 
Productcyclase/dehydrase 
Protein accessionYP_001808598 
Protein GI172060946 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACC TCGTCACCGA CGTGGCCGAT TACCCCAATT TCCTGCCGTG GTGCGGCGGC 
GTCGAGATTC GCCGTCAGGA CGACCGCGGG ATGGAAGCGC GCATCGACAT CAACTTCAAG
GGTATCAAGC AGCATTTCGC GACGCGCAAC ACGCAGCAGC GCCCGACGCG GATCGACATG
GAGTTCGCGG ACGGCCCGTT CAAGAAGTTC ACGGGCTCGT GGCGCTTCAT TCCGCTGCGC
GCCGATGCGT GCAAGATCGA ATTCGCGCTG CACTACGAGT TCTCGAGCAT CCTGCTCGAG
AAGATCATCG GGCCGGTGTT CAGCCATATC GCGAACACGT TCGTCGATTC GTTCGTGAAG
CGCGCCGACC AGCGCTACGG GAAGGGGTGA
 
Protein sequence
MFDLVTDVAD YPNFLPWCGG VEIRRQDDRG MEARIDINFK GIKQHFATRN TQQRPTRIDM 
EFADGPFKKF TGSWRFIPLR ADACKIEFAL HYEFSSILLE KIIGPVFSHI ANTFVDSFVK
RADQRYGKG