Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1897 |
Symbol | |
ID | 6176866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2112471 |
End bp | 2113154 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641681656 |
Product | hypothetical protein |
Protein accession | YP_001808595 |
Protein GI | 172060943 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.837528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT CCACCGCAAA CATCCTCCGC GAATACGGCC CGTTTCCGGG CGGCGACGGC GTGCACGGCG TCACGTTCGA CGGGCAGCAC GTGTGGTTCG CATCCGGCGA CAAGCTGAAC GCGCTCGACC CGGAACGCGG CACGACCGTG CGCACACTCG ACGTCGCCGC GCACGCGGGC ACCGCGTTCG ACGGGCGCCA CCTGTTCCAG ATCGTCGAGG ACCGCATCGA GAAGATCGAT CCCGATTCGG GCCGCGTGCT CGCGACGATC CCCGCGCCCG GCGGCGGCGC CGATTCCGGG CTCGCGTGGG CCGAAGGCAC GCTGTGGGTC GGCCAATACC GCGAGCGCAA GATTCATCAG GTGGATCCGC AATCGGGCGC CGTGCTGCGC ACGATCGAAT CGAACCGCTT CGTCACCGGC GTGACATGGG TCGACGGCGA GCTGTGGCAT GGCACCTGGG AGGCAGACGA GAGCGAGCTG CGGCGGATCG ACCCGCGCAC CGGGCAGGTG CTCGAGCAGG TCGACATGCC GCCCGGCGTC GGCGTGTCGG GGCTGGAGTC CGACGGTCGC GACACGTTCT ACTGCGGCGG CGGCAACAGC GGTAAGCTGC GCGCCGTACG CCGCCCCGCG CGGTCACCCG CGGCGGGCGA CGGTGCGGCT GCGGCCGAAC CGGCCGAGGG CTGA
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Protein sequence | MKRSTANILR EYGPFPGGDG VHGVTFDGQH VWFASGDKLN ALDPERGTTV RTLDVAAHAG TAFDGRHLFQ IVEDRIEKID PDSGRVLATI PAPGGGADSG LAWAEGTLWV GQYRERKIHQ VDPQSGAVLR TIESNRFVTG VTWVDGELWH GTWEADESEL RRIDPRTGQV LEQVDMPPGV GVSGLESDGR DTFYCGGGNS GKLRAVRRPA RSPAAGDGAA AAEPAEG
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