| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1880 |
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| Symbol | |
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| ID | 6177938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2094611 |
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| End bp | 2096095 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681639 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_001808578 |
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| Protein GI | 172060926 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.425689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.296294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGT TCAGTGTGGC GCACGACAGC GCGTATCCGG CGGAAGAAGG CGGCGAGGGC
GGCGGTTCCG CGTTGCCGGA CGGTTACAGT CGACGTTTGT ACAACGAAGA TTTGGCACCC
CTAAAGAATC AGACATGGGG TTCGTACAAC ATCTTCGCGT TCTGGATGTC GGACGTGCAC
AGCGTCGGCG GCTACGTGTT CGCAGGCAGC CTGTTCGCGC TCGGGCTGAC GAGCTGGCAG
GTGCTGATCG CACTGATCGT CGGCATCACG ATCGTGAACC GGCTGTGCAA CCTGATCGCG
CGCCCGAGTC AGCAGATCGG CGTGCCGTAT CCGGTCGCGT GCCGCGCGAC GTTCGGCGTG
CTCGGCGCGA ACGTGCCGGC CGTGATCCGC GGGCTGATCG CGATCGCGTG GTACGGCATC
CAGACCTATC TCGCGTCCAG CGCGCTCGTG ATCGTCGTGC TGAAGTTCTT CCCGCAATGG
CTGCCGTACG CGGACGTCCA TCGTTACGGC TTCCTCGGGC TGTCCGCGGT CGGCTGGGCC
GGCTTCATGC TGCTGTGGGT GCTGCAGGCG TTCGTGTTCT GGAACGGGAT GGAGACGATC
AAGAAGTTCA TCGACTTCGC GGGCCCGGCC GTCTACGTCG TGATGTTCAT CCTGGCCGGC
TACATGGTAT GGCGCGCGGG CTGGCGCAAC ATCGGCCTGA ACCTCGGCGG CGTCAAGTAT
CACGGCGCGG AAGTGATTCC GGTGATGATT ACGGCCGTGT CGCTCGTCGT GTCGTACTTC
TCCGGGCCGA TGCTGAACTT CGGCGACTTC TCGCGCTATT GCCGCTCGTT CGGCGACGTG
AAGCGCGGCA ACTTCTGGGG GTTGCCGGTC AACTTCCTCG CGTTCTCGCT CGTCACGGTG
ATCACGACGG CCGCGACGCT GCCGGTGTTC GGCGAACTCA TCACCGACCC GGTCGCGACG
GTCGGCCGCA TCGATCATCC GACCGCGGTG ATCCTCGGCG CGCTGACCTT CACGATCGCG
ACGATCGGGA TCAACATCGT CGCGAACTTC GTGTCGCCCG CGTTCGACTT CTCGAACGTC
GCGCCGCGGC TGATCAGCTG GCGCGCGGGC GGGATGCTCG CCGCCGTCGC GTCGATCTTC
ATCACGCCGT GGAACCTGTT CAACAACCCG GCCGTGATCC ACTACACGCT CGACGTGCTC
GGCGCGTTCA TCGGCCCGCT GTACGGCGTG CTGATCGCCG ACTTCTATCT CGTCAAGCGC
GGCCGCCTCG TGCGCGACGA TCTGTACACG ATGTCGGAGA GCGGCACCTA CTGGTACACG
GGCGGCGTGA ACCGCCGCGC GCTCGCCGCG CTGCTGCCGG CCGCGGTGAT CGCGGTCGTC
TGCGTGATGG TGCCGGCCTG GCAGGCCGCC GCGAACTTCT CGTGGTTCAT CGGCGCGGGG
CTCGGCTTCG CGTTCTACCG GCTGCTCGTG AGCACGAAGG CCTGA
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| Protein sequence | MAQFSVAHDS AYPAEEGGEG GGSALPDGYS RRLYNEDLAP LKNQTWGSYN IFAFWMSDVH
SVGGYVFAGS LFALGLTSWQ VLIALIVGIT IVNRLCNLIA RPSQQIGVPY PVACRATFGV
LGANVPAVIR GLIAIAWYGI QTYLASSALV IVVLKFFPQW LPYADVHRYG FLGLSAVGWA
GFMLLWVLQA FVFWNGMETI KKFIDFAGPA VYVVMFILAG YMVWRAGWRN IGLNLGGVKY
HGAEVIPVMI TAVSLVVSYF SGPMLNFGDF SRYCRSFGDV KRGNFWGLPV NFLAFSLVTV
ITTAATLPVF GELITDPVAT VGRIDHPTAV ILGALTFTIA TIGINIVANF VSPAFDFSNV
APRLISWRAG GMLAAVASIF ITPWNLFNNP AVIHYTLDVL GAFIGPLYGV LIADFYLVKR
GRLVRDDLYT MSESGTYWYT GGVNRRALAA LLPAAVIAVV CVMVPAWQAA ANFSWFIGAG
LGFAFYRLLV STKA
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