Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1879 |
Symbol | |
ID | 6178344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2093764 |
End bp | 2094600 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641681638 |
Product | Asp/Glu/hydantoin racemase |
Protein accession | YP_001808577 |
Protein GI | 172060925 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.53096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.236918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA AGCTGATCAA TCCCAATACG ACGCAGCGGA TGACGGATGC GATGGGCCGC TGCGCGCGTG AAGTCGCGGC CGCGGGCACC GAGATCGTCG CGGTGAGCCC GCCGATGGGG CCGCCGTCGA TCGAAGGCTA TTACGACGAG GCGCTCGCGA CGCCCGGGCT CCTCGCCGAG ATCGCACAGG GCGAGCGCGA CGGCTGCGAC GCGTACGTGA TCGCGTGTTT CGGCGATCCG GGCCTGTATG CGGCGCGCGA ACTCGCGCGC GGGCCGGTGA TCGGGATCGC CGAGGCGGCG ATGCACGCGG CGAGCGTGCT CGCGACGGGC TTCTCGGTCG TCACGACGCT CGCGCGCACC TGCGGGATGG CATGGCATCT CGCCGAGCGT TACGGGATGA AGCGCTTCTG CCGCAACGTG CGGGCGACCG ACGTCGCGGT GCTCGAGCTC GACCGGCCAG GCTCGGCCGC GCGGCGGATC ATCGTCGATG AATGCCGTCG CGCGCTCGAC GAGGACGGCG CCGACGCGAT CGTGCTCGGC TGCGCGGGGA TGGCCGAATT CGCGCACGAG ATCGAGCAGC AGATCGGCGC GCCGGTCGTG GAAGGCGTGA CGGCGGCCGT CAAATGGGCC GAGGCGCTCG TCGCGCTGCG CCTCGCGACC GCGAAGCGCG GCGACTATGC GCGGCCGCTG GCGAAGCGCT ATGACGGCGA ATTCGCGCGC TTCAGCCCGG CGGAGGCCGC ATCGGCAGCC GCGCCGGCCG CCGCCATGGC GTGCAGCGGG AGCGCCGAGC CGGAACGGAT GCCGGATTTG CCGCACCCGC ACATACACAC CGTCTGA
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Protein sequence | MKIKLINPNT TQRMTDAMGR CAREVAAAGT EIVAVSPPMG PPSIEGYYDE ALATPGLLAE IAQGERDGCD AYVIACFGDP GLYAARELAR GPVIGIAEAA MHAASVLATG FSVVTTLART CGMAWHLAER YGMKRFCRNV RATDVAVLEL DRPGSAARRI IVDECRRALD EDGADAIVLG CAGMAEFAHE IEQQIGAPVV EGVTAAVKWA EALVALRLAT AKRGDYARPL AKRYDGEFAR FSPAEAASAA APAAAMACSG SAEPERMPDL PHPHIHTV
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