Gene BamMC406_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1879 
Symbol 
ID6178344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2093764 
End bp2094600 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content71% 
IMG OID641681638 
ProductAsp/Glu/hydantoin racemase 
Protein accessionYP_001808577 
Protein GI172060925 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.53096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.236918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA AGCTGATCAA TCCCAATACG ACGCAGCGGA TGACGGATGC GATGGGCCGC 
TGCGCGCGTG AAGTCGCGGC CGCGGGCACC GAGATCGTCG CGGTGAGCCC GCCGATGGGG
CCGCCGTCGA TCGAAGGCTA TTACGACGAG GCGCTCGCGA CGCCCGGGCT CCTCGCCGAG
ATCGCACAGG GCGAGCGCGA CGGCTGCGAC GCGTACGTGA TCGCGTGTTT CGGCGATCCG
GGCCTGTATG CGGCGCGCGA ACTCGCGCGC GGGCCGGTGA TCGGGATCGC CGAGGCGGCG
ATGCACGCGG CGAGCGTGCT CGCGACGGGC TTCTCGGTCG TCACGACGCT CGCGCGCACC
TGCGGGATGG CATGGCATCT CGCCGAGCGT TACGGGATGA AGCGCTTCTG CCGCAACGTG
CGGGCGACCG ACGTCGCGGT GCTCGAGCTC GACCGGCCAG GCTCGGCCGC GCGGCGGATC
ATCGTCGATG AATGCCGTCG CGCGCTCGAC GAGGACGGCG CCGACGCGAT CGTGCTCGGC
TGCGCGGGGA TGGCCGAATT CGCGCACGAG ATCGAGCAGC AGATCGGCGC GCCGGTCGTG
GAAGGCGTGA CGGCGGCCGT CAAATGGGCC GAGGCGCTCG TCGCGCTGCG CCTCGCGACC
GCGAAGCGCG GCGACTATGC GCGGCCGCTG GCGAAGCGCT ATGACGGCGA ATTCGCGCGC
TTCAGCCCGG CGGAGGCCGC ATCGGCAGCC GCGCCGGCCG CCGCCATGGC GTGCAGCGGG
AGCGCCGAGC CGGAACGGAT GCCGGATTTG CCGCACCCGC ACATACACAC CGTCTGA
 
Protein sequence
MKIKLINPNT TQRMTDAMGR CAREVAAAGT EIVAVSPPMG PPSIEGYYDE ALATPGLLAE 
IAQGERDGCD AYVIACFGDP GLYAARELAR GPVIGIAEAA MHAASVLATG FSVVTTLART
CGMAWHLAER YGMKRFCRNV RATDVAVLEL DRPGSAARRI IVDECRRALD EDGADAIVLG
CAGMAEFAHE IEQQIGAPVV EGVTAAVKWA EALVALRLAT AKRGDYARPL AKRYDGEFAR
FSPAEAASAA APAAAMACSG SAEPERMPDL PHPHIHTV