Gene BamMC406_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1874 
Symbol 
ID6178343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2090013 
End bp2090423 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content67% 
IMG OID641681633 
Producthypothetical protein 
Protein accessionYP_001808572 
Protein GI172060920 
COG category[S] Function unknown 
COG ID[COG3602] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.636885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0948364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAC CTGAAAACGA CCTCGCCGTC CTGCTGCGCA CGATGCAGCC CGAGCTGCAT 
CGCGGTGCCT TCGCATTCGT CACGCTGCCG GCCGATGCCG AAATATCGTT ATCCGAAGCG
ATTGCGACGT TCCGCGAAGC GGAAGGCATG ACGGTCGTCG TCGACGAAGA GACTGCGGCA
CGCCGCGGCT GGCCCGTGCT GTTTCGCGCC GCGTGGATCA CGCTGACCGT GCATTCGGAT
CTCGCTGCGG TCGGCCTGAC GGCCGCGTTC GCGCGGGCTT TGGGCGCGGC CGGCATCAGC
TGCAACGTGA TGGCCGCTGC GTATCATGAC CACATCTTCG TGCCGTTCGA CGACGGCCCG
CGCGCGCTCG ATGCGCTCGT CGCGCTGCAG CGCGACGCGA TGCGCGGCTA G
 
Protein sequence
MSQPENDLAV LLRTMQPELH RGAFAFVTLP ADAEISLSEA IATFREAEGM TVVVDEETAA 
RRGWPVLFRA AWITLTVHSD LAAVGLTAAF ARALGAAGIS CNVMAAAYHD HIFVPFDDGP
RALDALVALQ RDAMRG