Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1872 |
Symbol | |
ID | 6176695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2088287 |
End bp | 2088640 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641681631 |
Product | hydroxyisourate hydrolase |
Protein accession | YP_001808570 |
Protein GI | 172060918 |
COG category | [R] General function prediction only |
COG ID | [COG2351] Transthyretin-like protein |
TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.889998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0980153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAAAGC TCACTACCCA CGTGCTGGAT ACGGCGCACG GTCGTCCCGG CGCGGCCATC AAGGTGGACC TCTACGCGCT GGACGGCGAA TCGCGCCGCG CGATCAAGAC CGTGCTGACC AATAGCGACG GCCGCTGCGA CGCACCGCTG CTCGAAGGCG CCGCGCTCGC CGCCGGCGAA TACGAACTCG TATTCCATGC CGGCGACTAC TTCGCGTCGC TCGGCGTGAA GGTGCCCGAA CCCCGTTTCG TCGACCGCGT CGTGCTGCGC TTCGGCATCG CAGACACCGC ATCGCACTAT CACGTGCCGC TGCTCGTGTC GCCGTGGTCT TACAGCACCT ATCGCGGCAG CTGA
|
Protein sequence | MGKLTTHVLD TAHGRPGAAI KVDLYALDGE SRRAIKTVLT NSDGRCDAPL LEGAALAAGE YELVFHAGDY FASLGVKVPE PRFVDRVVLR FGIADTASHY HVPLLVSPWS YSTYRGS
|
| |