Gene BamMC406_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1872 
Symbol 
ID6176695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2088287 
End bp2088640 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content66% 
IMG OID641681631 
Producthydroxyisourate hydrolase 
Protein accessionYP_001808570 
Protein GI172060918 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.889998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0980153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGC TCACTACCCA CGTGCTGGAT ACGGCGCACG GTCGTCCCGG CGCGGCCATC 
AAGGTGGACC TCTACGCGCT GGACGGCGAA TCGCGCCGCG CGATCAAGAC CGTGCTGACC
AATAGCGACG GCCGCTGCGA CGCACCGCTG CTCGAAGGCG CCGCGCTCGC CGCCGGCGAA
TACGAACTCG TATTCCATGC CGGCGACTAC TTCGCGTCGC TCGGCGTGAA GGTGCCCGAA
CCCCGTTTCG TCGACCGCGT CGTGCTGCGC TTCGGCATCG CAGACACCGC ATCGCACTAT
CACGTGCCGC TGCTCGTGTC GCCGTGGTCT TACAGCACCT ATCGCGGCAG CTGA
 
Protein sequence
MGKLTTHVLD TAHGRPGAAI KVDLYALDGE SRRAIKTVLT NSDGRCDAPL LEGAALAAGE 
YELVFHAGDY FASLGVKVPE PRFVDRVVLR FGIADTASHY HVPLLVSPWS YSTYRGS