| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1863 |
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| Symbol | |
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| ID | 6176640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2080374 |
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| End bp | 2081054 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641681622 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001808561 |
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| Protein GI | 172060909 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0107855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00208754 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCTTT TCGACTCTAT TTCGCGCACG ATCAAAGGCC TGCTGAACGA TGCGGCCGAC
TCGGTACAGG ATCCGTCGCG CGACGCACGG CAGATCGTGC GGGAGCTCGA CGACAGCATC
GGCCGTGCCG AGAATTCGCT GATCGAGATC GAGGCACAAG TCGCGACCCA GCGCAGCAAG
CGCGACGCGG CCGACGACAA GGTGAAGAAG TACGAAGACG GCGCGAAGCG CGCGCTGCAG
GCCGGCGACG AAGCACTCGC ACGCGAGGCG CTCGCCGCGC AGTCGAACGC GGAAGCCGAG
CGCGATGCAC TCGCGGCCGA GCTGACCACG CTCGAACCGT CGGTCGACAA GCTGAAGGGG
CAGATCGCCG ACATGCGCCA GCGTCGCAAC GACCTGAACT CGCGCTCGAA CATCCTGCAG
GCCAAGCATG AAATCGCGCA GGCGAAGGAC GTCGCGGCAA CCGCGCTCGG CGGCATCGGC
GGCAAGAACC TGTCCGAGGA CTTCCAGAAG CTCGAGGACA AGGTCGCACT GCAGAACGCG
CGCTCGGACG CACGCCTGAA CTCGGCCGAC ACGTCGAGCG GCAAGGCGCT CGAGGACAAG
CTCGCCGCGC TGAACAAGGG CCCGTCGGTG GAAGACCGCC TCGCCGCGCT GAAGAAGCAG
CTCGACACGC CCGCGCAGTA A
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| Protein sequence | MSLFDSISRT IKGLLNDAAD SVQDPSRDAR QIVRELDDSI GRAENSLIEI EAQVATQRSK
RDAADDKVKK YEDGAKRALQ AGDEALAREA LAAQSNAEAE RDALAAELTT LEPSVDKLKG
QIADMRQRRN DLNSRSNILQ AKHEIAQAKD VAATALGGIG GKNLSEDFQK LEDKVALQNA
RSDARLNSAD TSSGKALEDK LAALNKGPSV EDRLAALKKQ LDTPAQ
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