| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1861 |
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| Symbol | |
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| ID | 6178242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2076168 |
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| End bp | 2077187 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681620 |
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| Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_001808559 |
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| Protein GI | 172060907 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000111511 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000555512 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGACTG AACAACAGGG CACCGCCCAT ACGACGATCG ACGGCGAGCC GATTCCGACG
CTCGACGAAA TCGCCGCGCA GCATTTCGCG TTGTCGCCGT GGGTCGCACG CACGCCGGTG
TTCGAGCGCG CCGATCTCCC ATCCCTCGAG GGCACGCACG TCAACTTCAA GTTCGAGCTG
CTGCAGGCGA GCGGCAGCTT CAAGGCGCGC GGTGCGTTCA CGCACCTGCT GGCCCTCGAC
GAAGCGCGCA AGAACGCCGG CGTCACGTGT GTGTCGGCCG GCAATCATGC GGCGGCCGTC
GCGTATGCGG CGATGCGGCT CGGCAGCAGT GCGAAGGTCG TGATGTTCCA TACCGCGAGC
CCGACGCGCA TCGCGCAGTG CAAGCAGTAC CGCGCGGAAG TCGTGCTGGC CGGCAGCGCG
TCGCAGGCGT TCGACCTCGT GCGGCGGATC GAGGCCGAGG AAGGCCGCTT CTTCATCCAT
CCGTTCAACG GCTATCACAC GATTCTCGGC ACCGCGACGC TCGGCTACGA ATGGGCGACG
CAGACGCCCG ATCTCGACGC GGTGATCGTG CCGATCGGCG GCGGCGGGCT CGCGGCCGGC
ATGGCGACCG CGCTGCGGCT CGCAAATCCG CGCGTGCACG TGTACGGCGT CGAGCCGGAA
GGCGCCGACG CGATGTGCCG CAGCTTCGCG GCGAATCACA CGATCAAGAT GAGCGCGATG
CAGACCATCG CCGATTCGCT GATGGCGCCG CACACCGAGG AATACAGCTA CCAGCTATGC
CGGCGCCACA TCGACCGCAT CGTCACGGTG TCCGACGACG CGCTGCGCAC GGCGATGCTG
TTCCTGTTCT CACACCTGAA GCTCGCGGTC GAACCGGCGT GCGCGGCGGC GCTCGCGGCG
CTGCTCGGCC CGCTGCGCGA GACCCTGCAG GGCAAGCGGG TCGGCGTGCT GCTGTCTGGC
ACGAATACCG ACCCCGCGAC ACTCGGCATG CATCTCGCGC ACGCGAAACT GCAGCACTGA
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| Protein sequence | MSTEQQGTAH TTIDGEPIPT LDEIAAQHFA LSPWVARTPV FERADLPSLE GTHVNFKFEL
LQASGSFKAR GAFTHLLALD EARKNAGVTC VSAGNHAAAV AYAAMRLGSS AKVVMFHTAS
PTRIAQCKQY RAEVVLAGSA SQAFDLVRRI EAEEGRFFIH PFNGYHTILG TATLGYEWAT
QTPDLDAVIV PIGGGGLAAG MATALRLANP RVHVYGVEPE GADAMCRSFA ANHTIKMSAM
QTIADSLMAP HTEEYSYQLC RRHIDRIVTV SDDALRTAML FLFSHLKLAV EPACAAALAA
LLGPLRETLQ GKRVGVLLSG TNTDPATLGM HLAHAKLQH
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