Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1860 |
Symbol | |
ID | 6178156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2074885 |
End bp | 2076105 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641681619 |
Product | acetylornithine deacetylase |
Protein accession | YP_001808558 |
Protein GI | 172060906 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000219748 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000660568 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCACTC TCGACGCGAC GGCGCCGTCC GCCGCCGACC AAGGCGACGC TTCGCTCGTC AGCCTGCCCT GGATCAAGCA GCTGGTGTCG ATGGACACGA CGAGCCGCGT GCCGAACCTC GGCCTGATCG AAGCGGTGCG CGACGCGCTG GCCGCGAAGG GCATCGTGTC GACGCTCACG CACGATCCGC GCGAAGGCTG GGCCAACCTG TTCGCGACCG TGCCCGCGCA CGACGGCTCG ACCGACGGCG GCATCGTGCT GTCGGGGCAC ACCGACGTCG TGCCGGTCGA CGGCCAGCTG TGGGACAGCA ACCCGTTCGC GCCGGAAATC CGCGACGGCC GCCTGTACGG CCGCGGCACC TGCGACATGA AGGGCTTCAT CGGCACGGCG CTCGCGCTGC TGCCCGAGAT GCAGGCGACG AAGCTCGCGA AGCCGATTCA TTTCGCGCTG TCCTACGACG AGGAAATCGG CTGCGCGGGC GCACCGCTGC TGATCGCCGA TCTCGTCAAG CGCGGCGTGA AGCCGTCCGG CTGCATCGTC GGCGAGCCAA CCAGCATGCG GCCGATCATC GCGCACAAGG GCATCAACGC GTACCGCTGC TGCGTGCGCG GTCACGCCGC GCACTCGTCG CTGACGCCGA AGGGCCTGAA CGCGATCGAA TACGCGGCGC GCCTCATCTG CCACATCCGC GACATCGCCG AGCGCTTCCG TGCCGAAGGC CCGTTCGACG AGCTGTACGA CGTACCGTTC ACGACCGCGC AGACGAGCAC GATCCAGGGC GGCAACGCGA TCAACACGGT GCCGGCCGAA TGCCGGTTCG ACTTCGAGTT CCGCAACCTG CCGACGCTCG ATCCCGAGCA GATCTTCGCG CGCATCGAAG CGTATGCGCA GGAAACGCTG CTGCCGCAGA TGCTGCGCGA ACATCCGAAT GCGGCGATCG AGTTCTCGAA GATCGCGGCG GCACCCGGCC TCGACGCGAC GGAACAGGCC GCGATCACGC AGCTCGTGCG CGCGCTGACG GCCGACCAGG ACAAGCGCAA GGTCGCGTAC GGCACCGAGG CCGGCCTGTT CGAACGCGCG GGCATCCCGA GCGTCGTGTG CGGGCCCGGC AACATCGAGC AGGCGCACAA GCCGAACGAA TATGTCGAGC TCGCGCAGCT CGCCGCCTGC GAGCAGTTCC TGCGCAAGTT CATCCGCAGC ATGTCGGTCG ACGCACACTG A
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Protein sequence | MSTLDATAPS AADQGDASLV SLPWIKQLVS MDTTSRVPNL GLIEAVRDAL AAKGIVSTLT HDPREGWANL FATVPAHDGS TDGGIVLSGH TDVVPVDGQL WDSNPFAPEI RDGRLYGRGT CDMKGFIGTA LALLPEMQAT KLAKPIHFAL SYDEEIGCAG APLLIADLVK RGVKPSGCIV GEPTSMRPII AHKGINAYRC CVRGHAAHSS LTPKGLNAIE YAARLICHIR DIAERFRAEG PFDELYDVPF TTAQTSTIQG GNAINTVPAE CRFDFEFRNL PTLDPEQIFA RIEAYAQETL LPQMLREHPN AAIEFSKIAA APGLDATEQA AITQLVRALT ADQDKRKVAY GTEAGLFERA GIPSVVCGPG NIEQAHKPNE YVELAQLAAC EQFLRKFIRS MSVDAH
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