| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1856 |
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| Symbol | |
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| ID | 6176863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2069298 |
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| End bp | 2069825 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681615 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001808554 |
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| Protein GI | 172060902 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00777] alkylhydroperoxidase, AhpD family
[TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000315441 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000495243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAATTCA TCGACTCGAT TAAGGCACGT ATCCCCGACT ACGCGAAGGA CATTCGCCTG
AACCTCGACG GCACGATCTC GCGCTCGTCG CTCGAAGGCA ACGATGCAGT CGGCGTGGCG
CTGGCGGCGG CGGTCGCGGC GAAGAGCACC GTGCTCGTGA AGACGATCCG TGAAGCCGGC
GTGCTGTCGC CCGAAGAGAC GAACGCCGTG CTGACGGCGG CCGCGCTGAT GGGGATGAAC
AACACCTGGT ATCCGTATGT CGAGATGGCC GACGACGCCG ACCTGAAGAC GCAGCGCGCC
GAACTGCGGA TGGGCGCGTA TGCGTCGCAC GGCGGCGTCG ACAAGCGCCG GTTCGAGATG
TACGCGCTCG CCGCGTCGAT CGTCGGCAAG TGCCACTTCT GCGTGAAGTC GCACTATGCG
CTGCTGAAGA ACGAGCAAGG GATGACGACG ACGCAGCTGC GCGACGTCGG CCGCATTGCG
TCGGTGATCA ACGCCGCCGC GCAGGTGATC GCCGCCGAAG GCGAGTAA
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| Protein sequence | MEFIDSIKAR IPDYAKDIRL NLDGTISRSS LEGNDAVGVA LAAAVAAKST VLVKTIREAG
VLSPEETNAV LTAAALMGMN NTWYPYVEMA DDADLKTQRA ELRMGAYASH GGVDKRRFEM
YALAASIVGK CHFCVKSHYA LLKNEQGMTT TQLRDVGRIA SVINAAAQVI AAEGE
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