| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1838 |
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| Symbol | |
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| ID | 6176659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2047996 |
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| End bp | 2049930 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641681595 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001808537 |
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| Protein GI | 172060885 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.213983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0239616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATT TCTTCCGTAA TCACCAGCGC CTGATGATGG CGCTCCTGCT CCTTATCGTG
TTGCCGGGGC TGGGTTTCGT CGGGATCCAA GGTTTCCGCG GCTTCTTCGA CGACAGCGCG
AACGTCGCTG CGGTCAACGG GCACAAGATC ACGCGGGTCG AATTCGACGG CGCGTTCCGC
CAGCAGATCG ACCAGGCGCG CCAGGCGCTC GGTGGGCAGT TCGACATCAA GGCATTCGAC
ACGCCGGAAC ACCGCAAGCA GGTGCTCGAC GGCCTGATCC AGCAACGCGT GCTGGCCGAC
GAGACGCAAC GTCTGCACCT GACCGCATCC GACAACGCCG TGCGCGACGC GCTGATGAGC
GACCCGATGA TCGCGTCGCT GAAGAAGCCC GACGGTTCGA TCGACGTCGA GCGCTATGCG
CAGCTGCTGT CGTTCCAGGG AATGACGCCC GAGCAGTACC AGGAGCGCGT GCGCTACAGC
CTCGCGCTGC AGCAGATTCC GGCCAGCATC GTGGCGAGCG CATTCACGCC GAAGGGCCCG
GCGCAACGCC TGTCGGAGCT GGCCGCGCAG CAGCGCGAAG TGCAGGCGCT CGTGCTGAAG
ACGAGCGACT ACGCGGCGAA GGTGCAGCCG ACCGACGCGC AGCTCACCGC GTACTATGAC
GCGCACAAGC AGAGCTTCGC GACGCCGGAA ACCGCGACGA TCCAGTATCT CGTCTATTCG
CCGGCCGCGG CCGCCGCGAG CGCCCAGCCG ACCGATGCGG ACATCAAGAA GTTCTACGAC
GACAACCCGA CGCACTTCCG CTCGGAAGCG CAGGTGCGCG TGAGCCACAT CTTCATCGCC
GCGGCGAGCG ACGCGAGCGC CGCCGACAAG GCAGCCGCGA AGACGAAGGC CGAGCAGCTG
CTCGCCGACG TGAAGGCGCA TCCGGACCAG TTCGCGCAGA TCGCGCAGAA GAATTCGCAG
GATGCACCGT CGGCAGCGAA GGGCGGCGAT CTCGGCTTCA TCACGCGCGG CTCGACGGCG
GGCGGCAAGG CGTTCGACGA TGCCGCATTC GCGCTGAAGC AGGGCGACGT GAGCGGTGTC
GTGCAGTCGG ATCTCGGCTT CCACATCCTG AAGGCGACGG AAGTGAAGCC GTCGGTGGTC
AAGCCGTTCG CCGACGTGAA GGATCAGATC GCGGTGCAGC TGAAGCAGCA GTATGCAGCG
AAGGCGTTCA CGGACAACGC GGAAGGCTTC ACGTCGACCG TGTATGAAAA GGCGAAGACG
CTGCAGCCGG CCGCCGACAA GTACAAGCTG ACGATCCAGA CGGCCACCGT CATGCCGACG
CCGAACCCGC AGCTGCCGCC GACGAGCCCG CTGAACAATC CGAAGTTTCT CGCTGCCGTG
TTCGCGAGCG ACTCGGTGAA GAGCCGGAAC AACACGCAGG CGATCGACGT GGGCAACAAC
ACGCTGATCT CGGCGCGCGT GACCGACTAC AAGCCGGCTG CCGTGCCGGC GCTCGACACG
ATCAAGGACG CGGTGCGTCA GAAGGTCGTC GCGGAGCAAG CCACGGAACT CGCGAAGAAG
GACGGTGCGG CGAAGCTGGC CGAGCTGCAG AAGTCGAAAT CGGCCGATGG CTTCACGCCC
GTGCAGAAGG TGTCGCGCAT GCAATCGCAA GGCCTGACGC CGGCGGCGCT GAGCGCCGTC
TACAAGGTCG ATGCGAAGAC GCTGCCGGCC TACGTCGGGG TCGATCTCGG TGCGGACGGC
TACGCGATCT ATCGCGTGAA CGCGGTGATC CCGGGCACGG CCGTCGATCC GCAGCAGCTC
GCGGCCGCGC AGCATCAGAT GGCGCAGGTC GAAGCGCAAA GCGAAGGCGA AGCGTATCTC
GCCGCGCTGC GCGACCGCTC GAAGGTGAAG CTGTACGGCA CCACGCCGAG CCAGTCGCAG
GACAGCGGCA ACTGA
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| Protein sequence | MLDFFRNHQR LMMALLLLIV LPGLGFVGIQ GFRGFFDDSA NVAAVNGHKI TRVEFDGAFR
QQIDQARQAL GGQFDIKAFD TPEHRKQVLD GLIQQRVLAD ETQRLHLTAS DNAVRDALMS
DPMIASLKKP DGSIDVERYA QLLSFQGMTP EQYQERVRYS LALQQIPASI VASAFTPKGP
AQRLSELAAQ QREVQALVLK TSDYAAKVQP TDAQLTAYYD AHKQSFATPE TATIQYLVYS
PAAAAASAQP TDADIKKFYD DNPTHFRSEA QVRVSHIFIA AASDASAADK AAAKTKAEQL
LADVKAHPDQ FAQIAQKNSQ DAPSAAKGGD LGFITRGSTA GGKAFDDAAF ALKQGDVSGV
VQSDLGFHIL KATEVKPSVV KPFADVKDQI AVQLKQQYAA KAFTDNAEGF TSTVYEKAKT
LQPAADKYKL TIQTATVMPT PNPQLPPTSP LNNPKFLAAV FASDSVKSRN NTQAIDVGNN
TLISARVTDY KPAAVPALDT IKDAVRQKVV AEQATELAKK DGAAKLAELQ KSKSADGFTP
VQKVSRMQSQ GLTPAALSAV YKVDAKTLPA YVGVDLGADG YAIYRVNAVI PGTAVDPQQL
AAAQHQMAQV EAQSEGEAYL AALRDRSKVK LYGTTPSQSQ DSGN
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