| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1833 |
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| Symbol | |
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| ID | 6176970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2041815 |
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| End bp | 2043119 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641681590 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001808532 |
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| Protein GI | 172060880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.529299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTCA TCGTCATCGG CGGCGGACTC AGCGGCGTCG CCACCGCCTA CCAGCTGCGT
GCGGCCGGCC ATCGCGTGTG CGTGGTCGAG CGCCACGCGA CCGTCGCGCA GGGTGCGACC
TACGGCGACG GCGGCGCGCT GCTGCCGAGC CCGCTCGACG TCTGGTTCGG CCCCACCTTC
ATGCACCAGC GCCAGCCGCG CGACACCGGC ATCGTGTACA AGCCGGGCTT GAACGGCGGC
GTGCGCCGCT TCGTCAAGCA GCTCGCGGCG CTGCGCGAGC CCGACGCATT CGTCGCGCAG
TACGCGCGGC TGCGCCCGCT GATCGACGCG TCGCGCGAGT CGCTCGCCGA CATCGAGGCG
CGCTTCCAGC TCGAATTCGA GCAGAAACCG GGGATCCTGC ACGTCGTGCG CGACGCACGC
GACTGGGACG CGCTGCAGCC GGCGCTCGAC CTGCTGCGCA CGCTCGACCA GCCGTACCGG
GTACTCACCG CCGACGAATG CGCGGCACTC GAGCCGTCGG TGCCGGCCGA GCCCGGCTTC
GCCGGCGGCG TGCTGCTCGA GGCCGAGCGC ACCGGCAACT GCCCGCTGTT CGCGAAGCTC
GTCAAGCAGA CGCTCGACGA GCACGGCGTG CAGTTTCGCT TCGGCGCGGA CGTCGCCGCG
ATTCGCGTCG ACACCGGCCG CGCAGCGGTC GAGCTCGCGC CGCCGGCCGG CGGCCGGCAC
GCGACGAAGG CGCACGAGGT CGACGTGATT TCGGCCGACG CGATCGTGGT CGCCGCCGGC
GCCGGCAGCC TGCCGCTGCT GGAGCGGCTT GGCTGGCGGC TGCCGCTGCA TCCGGTGCGC
GCCCACACGC TGACCGCGCC GGTCGCGTAC GAAGAACATG CGCCGCACCT GAGCGTCGTC
GATTCGATCA AGCGGATCTC GATCACGCGC ACCCACCAGC GGTTGCGCAT CGGCGGCGGC
GGCGTGCTGC AGAGCCTCGC CGACACCGCG AAGCCGCTTC CCGAGCCGTT GTCCGAGGCC
GCGCTCGCGC TGCTCGGGCA GGCCGTCCAC GACTGGGTGC CGGGCGCCGC GAAGATTTCC
GCCGCGCTGT CGTGGCAAGG CACGCAGCTG CTGTCGCCGG ACGGCCTGCC GGTCGTCGGT
CCCACCCCGC ATCCGCGCGT GTTCGTCAAT TTCGGCCACG GCCCGGCCGG CTGGGGCCTC
GCGTGCGGGT CTGCTAAAGT GGTGACCGAC TGCGTGGGCG GCGCCGCGCA GCAGTGGCCG
GCCGACACGC TCGCCGCGCT GAGCGCCGCG CGCTTCACGA CCTGA
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| Protein sequence | MDVIVIGGGL SGVATAYQLR AAGHRVCVVE RHATVAQGAT YGDGGALLPS PLDVWFGPTF
MHQRQPRDTG IVYKPGLNGG VRRFVKQLAA LREPDAFVAQ YARLRPLIDA SRESLADIEA
RFQLEFEQKP GILHVVRDAR DWDALQPALD LLRTLDQPYR VLTADECAAL EPSVPAEPGF
AGGVLLEAER TGNCPLFAKL VKQTLDEHGV QFRFGADVAA IRVDTGRAAV ELAPPAGGRH
ATKAHEVDVI SADAIVVAAG AGSLPLLERL GWRLPLHPVR AHTLTAPVAY EEHAPHLSVV
DSIKRISITR THQRLRIGGG GVLQSLADTA KPLPEPLSEA ALALLGQAVH DWVPGAAKIS
AALSWQGTQL LSPDGLPVVG PTPHPRVFVN FGHGPAGWGL ACGSAKVVTD CVGGAAQQWP
ADTLAALSAA RFTT
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