| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1825 |
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| Symbol | |
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| ID | 6176518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2031001 |
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| End bp | 2032755 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681582 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001808524 |
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| Protein GI | 172060872 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.754963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.415446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCCC GCGTGCGTTG CGCGACGCCC GTCTGGCCGT GGACGGGCCG CAAGCCGGCG
TACCGCTTCA AGGCTGGTCA CCGATTCGCG TCCTTCCGGG AGAACAAGAC GATGGGTAAG
CCGTTGCTGG GCCAGATGAT GGACATGCCG TTGCTGGTGT CGTCGCTGAT CGCGCATGCC
GCGCGTTATG CGGGCGACAC GGAGATCGTG TCGAAGCGCG TGGAAGGCGA CCTGCATCGC
TACACGTACC GCGACTGCGA GCAACGCGCG AAGCGCCTCG CGCAGGCGCT CGCCCGGCTT
GGCGTCGAAT CGGGCGACCG CGTCGGCACG CTGGCCTGGA ACGGCTACCG GCACCTGGAG
GCGTATTACG GGATCGGCGG AATGGGCGCC GTGTGCCACA CGATCAACCC GCGCCTCTTT
CCGGAGCAGA TCGCCTACAT CGTCAATCAC GCGGAAGACC GCTACGTTTT CTTCGACATC
AATTTCGCGC CGCTCGTCGA TGCGCTCGCG CCGCAGTGCC CGCACGTGAA GGGCTGGATC
GCGATGACCG ACGCCGCGCA CGTGCCGTCC GGCGCGCTGC CGTACCTGTG CTACGAAACG
CTCGTCGACG CCGAAGACGG CCGCTACGAC TGGCCGCGCC TCGACGAGCT GCAGGCGTCG
GGCCTTTGCT ACACGTCGGG CACGACGGGC AATCCGAAGG GCGTGCTGTA TTCGCATCGC
TCGACGGTGC TGCACGCATA CGGCGCCGCG TTGCCCGACG CGATGAACCT GTCGGCGCTG
GACGCCGTGC TGCCCGTCGT GCCGATGTTC CATGTGAACG CGTGGGGGCT GCCGTACGCG
GTGCCGCTCA CGGGCGGCAA GCTCGTGCTG CCCGGCAAGG ACCTCGACGG CAAGTCGCTG
TACGAACTGA TGGAGGCCGA GCGCGTGACG TTTTCCGCGG GCGTGCCGAC CGTGTGGCTC
GGGCTGCTGA ACTACATGCG CGAGGCCGGC GTGCGCTTCT CGACGCTCAA CCGCACGGTG
ATCGGCGGCT CCGCGTGCCC GCCCGCGATG CTGCGCACGT TCGAGGACGA ATATGGCGTA
CGCGTGATCC ATGCGTGGGG GATGACCGAG CTGTCGCCGC TCGGCACGCT CGCGAAGCTG
AACTGGGCGC AGTCGCAGCG GCCGCTCGAC ACGCAGCGCC GGCTGCTGGA GAAGCAGGGG
CGCGTGATCT GCGGCGTCGA CATGCGCATC GTCGGCGACG ACGGCCGCGA ACTGCCGTGG
GATGGCGTCG CGTTCGGCGA ATTGCAGGTG CGCGGGCCCT GGGTGATCGA TCACTACTTC
AGGAGCGACA CGTCGCCGCT GTCGGACGGC TGGTTCCCCA CCGGCGACGT CGCGACGATC
GACTCCGACG GCTTCCTGCA GATCACCGAC CGCAGCAAGG ACGTGATCAA GTCCGGCGGC
GAATGGATCA GCTCGATCGA CATCGAGAAC GTCGCGATCG CGCACCCGGG CGTCGCCGAA
GCCGCCTGCA TCGCCTGCGC GCACCCGAAA TGGACCGAGC GTCCGCTGCT CGTCGTGGTG
CCGCGCGAGG GGGCGAACCT CACCCGCGAC GCGCTGCTCG CGTTCTACGA AGGCAAGGTC
GCGAAGTGGT GGGTGCCCGA CGACGTCGTG TTCGTCGAAT CGCTGCCGCA CACCGCGACC
GGCAAGCTGC AGAAGCTGAA GCTGCGCGAG ACCTTCCGCG ACTACGTGCT GCCGACGGCA
CTCGGCGAGC CGTAA
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| Protein sequence | MAARVRCATP VWPWTGRKPA YRFKAGHRFA SFRENKTMGK PLLGQMMDMP LLVSSLIAHA
ARYAGDTEIV SKRVEGDLHR YTYRDCEQRA KRLAQALARL GVESGDRVGT LAWNGYRHLE
AYYGIGGMGA VCHTINPRLF PEQIAYIVNH AEDRYVFFDI NFAPLVDALA PQCPHVKGWI
AMTDAAHVPS GALPYLCYET LVDAEDGRYD WPRLDELQAS GLCYTSGTTG NPKGVLYSHR
STVLHAYGAA LPDAMNLSAL DAVLPVVPMF HVNAWGLPYA VPLTGGKLVL PGKDLDGKSL
YELMEAERVT FSAGVPTVWL GLLNYMREAG VRFSTLNRTV IGGSACPPAM LRTFEDEYGV
RVIHAWGMTE LSPLGTLAKL NWAQSQRPLD TQRRLLEKQG RVICGVDMRI VGDDGRELPW
DGVAFGELQV RGPWVIDHYF RSDTSPLSDG WFPTGDVATI DSDGFLQITD RSKDVIKSGG
EWISSIDIEN VAIAHPGVAE AACIACAHPK WTERPLLVVV PREGANLTRD ALLAFYEGKV
AKWWVPDDVV FVESLPHTAT GKLQKLKLRE TFRDYVLPTA LGEP
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