| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1824 |
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| Symbol | |
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| ID | 6176696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2028723 |
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| End bp | 2030807 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681581 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001808523 |
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| Protein GI | 172060871 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.995834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.332869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTGG ACTATTCGAC TCGCGACGGC GTGGCCGTCA TCACGCTCAA CAATCCGCCC
GTCAACGGGC TCGGCCTGTC GACGCGCCAG GGCGTCATGG ACGCGCTCGA TCGCGCGTTG
CAGGACGCGT CGGTCACGGC GATCGTATTG ACGGGCACCG GCCGCGCGTT TTCCGGCGGC
GCCGACATCA CCGAATTCAA TACCCCGAAG GCCCTGCAGG AGCCGACGCT GCACACCGTG
ATTCGCGCGG TGGAGGCGAG CGCGAAGCCG GTCGTCGCGG CGCTGCACAG CGTCGTGATG
GGCGGCGGGC TGGAGCTCGC GCTCGGCGCG CACTATCGCG TCGCGGCGCC CGGTGCGCAG
GTCGCGCTGC CCGAAGTGAA GCTCGGCCTG CTGCCGGGCG CGGGCGGCAC GCAGCGGCTG
CCGCGTGCCG TGGGCCTCGA AACCGCGCTG AACATGATCG TGTCGGGCGC CCCGGTGCCG
TCGGAGCAAC TCGCGAACAG CGGGCTGTTC GACGCGATGG CCGACGGCGA CCTGCTCGAC
GCGGCCGTCG CGTTCGCGCG CAAGGTCGGC GCGCAGAAGG GGCCGCACCC GCGCGTGCGC
GATCGTAAGA TCGTCCACGA GAACGCCGCG GGTTTCATCC AGTTCGCGCG GAATTCGGCG
CGGGCCGCCG CGCCGAATTT CCCCGCGCCG CACAAGTGCA TCGACGCGAT CGAAGCCGGC
GTGCTGAACG GTTTCGACAA GGGCAGCATC GCCGAGCGCG AGGGCTTCGT CGCGCTGATG
ATGACGCCGG AAAGCCGCGC GCTGCGGCAT GCATTCTTCG GCGAGCGCGC GGCGAGCAAG
ATTCCCGACG TGCCGGCCGA CACGCCGGTG CGCGAGATTC GTCGCGTCGG CGTGATCGGC
GCGGGCACGA TGGGCGGCGG GATCGCGATG AACTTCATCA ACGCGGGCCT GCCCGTCACG
CTGCTCGAGA CGAAGCAGGA TGCACTCGAT CGCGGGCTGG CCACGATCCG CAAGAACTAC
GACGCGCAGG TGAAGAAGGG CAAGCTCACG CAGCAGAAGC TCGACGCGCG CATGGCTCTG
ATCACGCCGA CGCTGTCCTA CGACGACCTG AAGGACGCGG ACCTGATCGT CGAGGCCGTG
TTCGAGGAGC TCGGCGTGAA GGAGCAGGTG TTCGGCCAGC TCGATGCCGT GGCGAAGCCG
GGCGCGATCC TCGCGTCGAA CACGTCGACG CTCGACGTCG ACAAGATCGC CGCGTTCACG
AAGCGTCCGC AGGACGTGGT CGGCATGCAC TTCTTCAGCC CCGCGAACGT GATGAAGCTG
CTCGAGGTCG TGCGCGGCGC GCAGACCGCG AAGGACGTGC TCGCGACCGT GATGGCGGTC
GCGAAGAAGA TCCGCAAGAC GGCGGTCGTG TCGGGCGTGT GCGACGGCTT CATCGGCAAC
CGGATGATCG AGCAGTACAT CCGCCAGGCG CTCTTCATGC TCGAGGAAGG CGCGCTGCCC
GCGCAGGTCG ATCGTGCGAT CGAGAAGTTC GGTTTCGCGA TGGGGCCGTT CCGGATGAGC
GACCTCGCCG GCAACGACAT CGGCTGGGCG ATCCGCAAGC GCCGCTATGT CGAGAAGCCC
GATCTGCATT ACTCGAAGAT GGCCGACCGC CTGTGCGAAC TGGGCCGCTT CGGCCAGAAG
ACGGGCGGCG GCTGGTACGA CTACGTGCCG GGCGATCGCA AGGCGAAGCC GTCGGCACTC
GTCGACGAGA TGGTCGTCGC GTATTCGAAG GAATGCGGCA TCGAGCGGCG CAAGATCGGC
GACGACGAAA TCGTCGAGCG GCTCGTGTTC GCGCTCGTGA ACGAAGGCGC GAAGATTCTC
GAGGAGAAGA TCGCGTCGAA GGCGTCCGAC ATCGACATGG TCTATCTGAC CGGCTACGGC
TTCCCGCTCT GGCGTGGCGG CCCGATGCTG TACGCGGACA TGGTCGGCCT CTACAACGTG
GAGCGGGCGA TCCGACGCTA CGCGGCCGCG CCGAACGGCG ACGCGTGGCA GCTCGCGCCG
TCGATCGTCG AGCGGGCGGC GGCCGGACGC GGATTCAACG ACTGA
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| Protein sequence | MAVDYSTRDG VAVITLNNPP VNGLGLSTRQ GVMDALDRAL QDASVTAIVL TGTGRAFSGG
ADITEFNTPK ALQEPTLHTV IRAVEASAKP VVAALHSVVM GGGLELALGA HYRVAAPGAQ
VALPEVKLGL LPGAGGTQRL PRAVGLETAL NMIVSGAPVP SEQLANSGLF DAMADGDLLD
AAVAFARKVG AQKGPHPRVR DRKIVHENAA GFIQFARNSA RAAAPNFPAP HKCIDAIEAG
VLNGFDKGSI AEREGFVALM MTPESRALRH AFFGERAASK IPDVPADTPV REIRRVGVIG
AGTMGGGIAM NFINAGLPVT LLETKQDALD RGLATIRKNY DAQVKKGKLT QQKLDARMAL
ITPTLSYDDL KDADLIVEAV FEELGVKEQV FGQLDAVAKP GAILASNTST LDVDKIAAFT
KRPQDVVGMH FFSPANVMKL LEVVRGAQTA KDVLATVMAV AKKIRKTAVV SGVCDGFIGN
RMIEQYIRQA LFMLEEGALP AQVDRAIEKF GFAMGPFRMS DLAGNDIGWA IRKRRYVEKP
DLHYSKMADR LCELGRFGQK TGGGWYDYVP GDRKAKPSAL VDEMVVAYSK ECGIERRKIG
DDEIVERLVF ALVNEGAKIL EEKIASKASD IDMVYLTGYG FPLWRGGPML YADMVGLYNV
ERAIRRYAAA PNGDAWQLAP SIVERAAAGR GFND
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