| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1821 |
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| Symbol | |
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| ID | 6176391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2024842 |
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| End bp | 2026242 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681578 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001808520 |
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| Protein GI | 172060868 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCACGA CCTATGCATC CGGGGAACCG CCGCGTGTCG TCAGCGCGGC CGCGAGGCTC
TACGCGAAAT GCCTGCTGGT CGGATTCGCG CTCTTGCCGG CCTATCTCAT TGCCTATTTG
TGGTTCTTCG GCGACCCACA CGTCCTGTTC GAGAGCCACG CGTTCCATGA AATCGCGATC
GCGGCCGCCA CGCTCGAAGG CGCCTTCGTC ACCTACGTGA CGTGGGTCTG CTACCGGTCG
TCCGGCGAGC CGCTGCTGCG CTGGCTGACA CTCGGCTTTC TCGGCTTCGC GATGATCTAC
GCGCTGCACG GGGCGTTCAC CGGGATGGCG CACCACAATA TCTGGCTGTT CCTGCTGTAC
GGGCCCGCGT CGCGGCTCGT GATGTCGATC CTGCTGCTGA CGGGCATGCT GTCGTATTCG
AATCCGCCCG ACCGGCAGGA CAAGCGCACG CGCGCGCTCA CCTGGCTGCC GTGGATCGCG
TTCTTCCTGA TCATCAATGT GGCGGTCGCC TACATCGCGT ATTCGCCGGT CGCCGGCGCG
CTGGGCACGC GGCTGTCGAT GGAAGGCGGC GCGCTGATTT TTTCGCTGCT GAACGTCGGC
GTGCTGCTCG CCAGGCGGAT CCGTTCGCCG CTGATGGTGA TCTACGGGAT GTCAATCATG
GCGTTCGCGC TATCGTCGGT CGCGTTCATC CTCGGCAAGC CATGGAATCA CATGTGGTGG
CTCGCGCATG CGATCTTCGC GGGCGGGTTC TTCCTGCTCA GCTATGGCGT CGTGCAGGCG
CTGCAGACGA CGCGCTCGTT CTCGGCGATC TACCGCCAGG AAGATTTGAT GAGCCGGCTG
TCGGAATCGA TGGCGCGCAC CGATAGCGCG CTGCAGGAGT TGCGGCGCAC GAACCAGAAG
CTCGAGTACA TGGCCGCGAC CGATCCGATG ACGGGTGCGT CGAACCGCCG CCAGTTCATC
GGGCAGGTCG AGCGCGAGAT CGTGCGTGCG GAACGCGACG GTACGCCGTT TTGCCTGTTG
GCGCTCGATC TCGACAACTT CAAGAACATC AACGACGCAT ACGGACACCA GATCGGCGAC
GAGGTGCTGC GCGGCGTCGT GCGCCAGTGT CTCGAGGCGA TTCGTCCGGC GGGTGCGCTC
GCGCGGGTCG GCGGCGAGGA GTTCATGGCG CTGTTGCCCG AGATGCCGCT CGAAGGTGCC
CGCATGACGG CCGAGCGCGT GCGTTCGTCG ATCGCGAGTT CGCCGTTCGG GCTGGATTTC
AAGCGCGTGC AGGTGACGGT CAGCGTCGGC GTCGCGCAGT ACGGTGTCGA CGGGAGTACG
GTCGATGCGT TGCTGCGCGC GGTCGACGAA CGGCTGTACC AGGCGAAGCG CGACGGGCGC
AATCGCGTGG TCGCGCACTG A
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| Protein sequence | MSTTYASGEP PRVVSAAARL YAKCLLVGFA LLPAYLIAYL WFFGDPHVLF ESHAFHEIAI
AAATLEGAFV TYVTWVCYRS SGEPLLRWLT LGFLGFAMIY ALHGAFTGMA HHNIWLFLLY
GPASRLVMSI LLLTGMLSYS NPPDRQDKRT RALTWLPWIA FFLIINVAVA YIAYSPVAGA
LGTRLSMEGG ALIFSLLNVG VLLARRIRSP LMVIYGMSIM AFALSSVAFI LGKPWNHMWW
LAHAIFAGGF FLLSYGVVQA LQTTRSFSAI YRQEDLMSRL SESMARTDSA LQELRRTNQK
LEYMAATDPM TGASNRRQFI GQVEREIVRA ERDGTPFCLL ALDLDNFKNI NDAYGHQIGD
EVLRGVVRQC LEAIRPAGAL ARVGGEEFMA LLPEMPLEGA RMTAERVRSS IASSPFGLDF
KRVQVTVSVG VAQYGVDGST VDALLRAVDE RLYQAKRDGR NRVVAH
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