Gene BamMC406_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1814 
Symbol 
ID6177420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2017979 
End bp2018806 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content57% 
IMG OID641681573 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_001808515 
Protein GI172060863 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.657854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGGTG TACTACTTAG TATAAATCCC GAAAGCAACA GCAAGTTCAC AAACGAGGTC 
AACATCATGG AAATCGGCAT CATAGGAACC GGCAATATAG GCGGCACGCT TGCGCGTCGT
CTGAAGACCG CGGGTCACGG CATCCGCGTC GCGAACTCGA AGGGGCCGGC AGCGGTCGAG
GATTTTGCGA ACGAAATCGG TGCGACGGCG GCGGATGTTA AGGGCGCAAT CTCTGGCGCG
GACGTGATCG TCCTGGCGAT TCCGCTACCG GCAATGGCAA AATTGCCGGC TGATGTGTTC
GACTCGATTC CTTCACATGT TCCGGTAATC GATACCAGCA ACTACTATCC CGGCCTGCGC
GATTCGCGCA TCCCTGAAAT CGACGAAGGG ATGCCTGAGA GCGTGTGGGT TTCCCGACAA
CTCGGCCGCT CAGTCATCAA GGCGTTCAAC AATATTCTCG CGCATTCGCT CGCGCATCTC
GGCCTGCGTG AAGGATCACC CAACCGTTTG GCAGTTGCTG TCGCGGGCGA TGACGACGAT
GGCAAGCAAA TCGTCATGGA ATTGGTCAAT CAAATCGGCT TCGATCCCGT CAATGCCGGT
TCGCTGGAAG ATTCGTGGCG GCAACAGCCG TCGACGCCGG CCTACTGCTG CGATTACGGC
GCTGCGATGA TGCGCAAAGG CCTTGCTGCT GCGATCAAGG ACGAAGCCTC TGTGAAACGA
GATCGGATGC CCGAGCTTTT CGCGAAGCTC GGCCCGAACT ACAGCCATGA CGATATCGTT
GCAATGAATC GGGCTGCGAA TGCCGTAGCG GGCTTCCCGT CACGATAA
 
Protein sequence
MWGVLLSINP ESNSKFTNEV NIMEIGIIGT GNIGGTLARR LKTAGHGIRV ANSKGPAAVE 
DFANEIGATA ADVKGAISGA DVIVLAIPLP AMAKLPADVF DSIPSHVPVI DTSNYYPGLR
DSRIPEIDEG MPESVWVSRQ LGRSVIKAFN NILAHSLAHL GLREGSPNRL AVAVAGDDDD
GKQIVMELVN QIGFDPVNAG SLEDSWRQQP STPAYCCDYG AAMMRKGLAA AIKDEASVKR
DRMPELFAKL GPNYSHDDIV AMNRAANAVA GFPSR