Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1814 |
Symbol | |
ID | 6177420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2017979 |
End bp | 2018806 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641681573 |
Product | NADP oxidoreductase coenzyme F420-dependent |
Protein accession | YP_001808515 |
Protein GI | 172060863 |
COG category | [R] General function prediction only |
COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.657854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGGTG TACTACTTAG TATAAATCCC GAAAGCAACA GCAAGTTCAC AAACGAGGTC AACATCATGG AAATCGGCAT CATAGGAACC GGCAATATAG GCGGCACGCT TGCGCGTCGT CTGAAGACCG CGGGTCACGG CATCCGCGTC GCGAACTCGA AGGGGCCGGC AGCGGTCGAG GATTTTGCGA ACGAAATCGG TGCGACGGCG GCGGATGTTA AGGGCGCAAT CTCTGGCGCG GACGTGATCG TCCTGGCGAT TCCGCTACCG GCAATGGCAA AATTGCCGGC TGATGTGTTC GACTCGATTC CTTCACATGT TCCGGTAATC GATACCAGCA ACTACTATCC CGGCCTGCGC GATTCGCGCA TCCCTGAAAT CGACGAAGGG ATGCCTGAGA GCGTGTGGGT TTCCCGACAA CTCGGCCGCT CAGTCATCAA GGCGTTCAAC AATATTCTCG CGCATTCGCT CGCGCATCTC GGCCTGCGTG AAGGATCACC CAACCGTTTG GCAGTTGCTG TCGCGGGCGA TGACGACGAT GGCAAGCAAA TCGTCATGGA ATTGGTCAAT CAAATCGGCT TCGATCCCGT CAATGCCGGT TCGCTGGAAG ATTCGTGGCG GCAACAGCCG TCGACGCCGG CCTACTGCTG CGATTACGGC GCTGCGATGA TGCGCAAAGG CCTTGCTGCT GCGATCAAGG ACGAAGCCTC TGTGAAACGA GATCGGATGC CCGAGCTTTT CGCGAAGCTC GGCCCGAACT ACAGCCATGA CGATATCGTT GCAATGAATC GGGCTGCGAA TGCCGTAGCG GGCTTCCCGT CACGATAA
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Protein sequence | MWGVLLSINP ESNSKFTNEV NIMEIGIIGT GNIGGTLARR LKTAGHGIRV ANSKGPAAVE DFANEIGATA ADVKGAISGA DVIVLAIPLP AMAKLPADVF DSIPSHVPVI DTSNYYPGLR DSRIPEIDEG MPESVWVSRQ LGRSVIKAFN NILAHSLAHL GLREGSPNRL AVAVAGDDDD GKQIVMELVN QIGFDPVNAG SLEDSWRQQP STPAYCCDYG AAMMRKGLAA AIKDEASVKR DRMPELFAKL GPNYSHDDIV AMNRAANAVA GFPSR
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